Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Gm22711-201ENSMUST00000116890 133 ntBASIC13.3□□□□□ -0.28
Cchcr1Q8K2I2 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC13.3□□□□□ -0.28
Cchcr1Q8K2I2 Gm15808-201ENSMUST00000119046 604 ntBASIC13.3□□□□□ -0.28
Cchcr1Q8K2I2 Gm11244-201ENSMUST00000121243 237 ntBASIC13.3□□□□□ -0.28
Cchcr1Q8K2I2 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC13.3□□□□□ -0.28
Cchcr1Q8K2I2 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cchcr1Q8K2I2 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC13.3□□□□□ -0.28
Cchcr1Q8K2I2 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Cchcr1Q8K2I2 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC13.3□□□□□ -0.28
Cchcr1Q8K2I2 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Cchcr1Q8K2I2 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Cchcr1Q8K2I2 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Cchcr1Q8K2I2 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Cchcr1Q8K2I2 Gm2383-201ENSMUST00000181461 807 ntBASIC13.3□□□□□ -0.28
Cchcr1Q8K2I2 Gm28450-201ENSMUST00000187349 638 ntBASIC13.3□□□□□ -0.28
Cchcr1Q8K2I2 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC13.3□□□□□ -0.28
Cchcr1Q8K2I2 Gm43852-201ENSMUST00000202098 917 ntBASIC13.3□□□□□ -0.28
Cchcr1Q8K2I2 Gm17825-201ENSMUST00000206836 794 ntBASIC13.3□□□□□ -0.28
Cchcr1Q8K2I2 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cchcr1Q8K2I2 Gm5369-201ENSMUST00000217499 588 ntBASIC13.3□□□□□ -0.28
Cchcr1Q8K2I2 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cchcr1Q8K2I2 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cchcr1Q8K2I2 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cchcr1Q8K2I2 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cchcr1Q8K2I2 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cchcr1Q8K2I2 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cchcr1Q8K2I2 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC13.3□□□□□ -0.28
Cchcr1Q8K2I2 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC13.3□□□□□ -0.28
Cchcr1Q8K2I2 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cchcr1Q8K2I2 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
Cchcr1Q8K2I2 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cchcr1Q8K2I2 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cchcr1Q8K2I2 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cchcr1Q8K2I2 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cchcr1Q8K2I2 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cchcr1Q8K2I2 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cchcr1Q8K2I2 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cchcr1Q8K2I2 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cchcr1Q8K2I2 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cchcr1Q8K2I2 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cchcr1Q8K2I2 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Cchcr1Q8K2I2 Gm18198-201ENSMUST00000204986 1551 ntBASIC13.29□□□□□ -0.28
Cchcr1Q8K2I2 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cchcr1Q8K2I2 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cchcr1Q8K2I2 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
Cchcr1Q8K2I2 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cchcr1Q8K2I2 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cchcr1Q8K2I2 Gm22920-201ENSMUST00000102175 109 ntBASIC13.29□□□□□ -0.28
Cchcr1Q8K2I2 Snord17-201ENSMUST00000104526 238 ntBASIC13.29□□□□□ -0.28
Cchcr1Q8K2I2 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cchcr1Q8K2I2 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cchcr1Q8K2I2 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Cchcr1Q8K2I2 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC13.29□□□□□ -0.28
Cchcr1Q8K2I2 Gm42588-201ENSMUST00000200538 1297 ntBASIC13.29□□□□□ -0.28
Cchcr1Q8K2I2 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC13.29□□□□□ -0.28
Cchcr1Q8K2I2 Gm5302-201ENSMUST00000202130 796 ntBASIC13.29□□□□□ -0.28
Cchcr1Q8K2I2 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cchcr1Q8K2I2 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC13.29□□□□□ -0.28
Cchcr1Q8K2I2 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC13.29□□□□□ -0.28
Cchcr1Q8K2I2 CT009546.1-201ENSMUST00000222573 1120 ntBASIC13.29□□□□□ -0.28
Cchcr1Q8K2I2 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cchcr1Q8K2I2 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cchcr1Q8K2I2 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Cchcr1Q8K2I2 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cchcr1Q8K2I2 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cchcr1Q8K2I2 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Cchcr1Q8K2I2 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Cchcr1Q8K2I2 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cchcr1Q8K2I2 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cchcr1Q8K2I2 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cchcr1Q8K2I2 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Cchcr1Q8K2I2 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cchcr1Q8K2I2 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cchcr1Q8K2I2 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cchcr1Q8K2I2 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cchcr1Q8K2I2 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Cchcr1Q8K2I2 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cchcr1Q8K2I2 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cchcr1Q8K2I2 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Cchcr1Q8K2I2 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cchcr1Q8K2I2 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cchcr1Q8K2I2 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC13.28□□□□□ -0.28
Cchcr1Q8K2I2 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cchcr1Q8K2I2 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cchcr1Q8K2I2 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Cchcr1Q8K2I2 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cchcr1Q8K2I2 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cchcr1Q8K2I2 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cchcr1Q8K2I2 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cchcr1Q8K2I2 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cchcr1Q8K2I2 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cchcr1Q8K2I2 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC13.28□□□□□ -0.28
Cchcr1Q8K2I2 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cchcr1Q8K2I2 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cchcr1Q8K2I2 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Cchcr1Q8K2I2 Gm9089-201ENSMUST00000122027 526 ntBASIC13.28□□□□□ -0.28
Cchcr1Q8K2I2 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Cchcr1Q8K2I2 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC13.28□□□□□ -0.28
Cchcr1Q8K2I2 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC13.28□□□□□ -0.28
Cchcr1Q8K2I2 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms