Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC12.56□□□□□ -0.4
Ccdc38Q8CDN8 Gm7504-201ENSMUST00000201449 424 ntBASIC12.56□□□□□ -0.4
Ccdc38Q8CDN8 Gm18539-201ENSMUST00000204745 1090 ntBASIC12.56□□□□□ -0.4
Ccdc38Q8CDN8 Gm17825-201ENSMUST00000206836 794 ntBASIC12.56□□□□□ -0.4
Ccdc38Q8CDN8 Gm8342-201ENSMUST00000209839 757 ntBASIC12.56□□□□□ -0.4
Ccdc38Q8CDN8 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC12.56□□□□□ -0.4
Ccdc38Q8CDN8 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC12.56□□□□□ -0.4
Ccdc38Q8CDN8 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC12.56□□□□□ -0.4
Ccdc38Q8CDN8 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC12.56□□□□□ -0.4
Ccdc38Q8CDN8 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc38Q8CDN8 AC156501.1-201ENSMUST00000228219 270 ntBASIC12.56□□□□□ -0.4
Ccdc38Q8CDN8 AC135114.1-201ENSMUST00000228682 270 ntBASIC12.56□□□□□ -0.4
Ccdc38Q8CDN8 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Ccdc38Q8CDN8 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Ccdc38Q8CDN8 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Ccdc38Q8CDN8 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC12.56□□□□□ -0.4
Ccdc38Q8CDN8 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc38Q8CDN8 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc38Q8CDN8 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc38Q8CDN8 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Ccdc38Q8CDN8 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc38Q8CDN8 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc38Q8CDN8 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc38Q8CDN8 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc38Q8CDN8 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc38Q8CDN8 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc38Q8CDN8 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc38Q8CDN8 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc38Q8CDN8 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC12.56□□□□□ -0.4
Ccdc38Q8CDN8 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc38Q8CDN8 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc38Q8CDN8 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Ccdc38Q8CDN8 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc38Q8CDN8 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC12.55□□□□□ -0.4
Ccdc38Q8CDN8 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc38Q8CDN8 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc38Q8CDN8 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc38Q8CDN8 Bcl2-202ENSMUST00000189999 2841 ntBASIC12.55□□□□□ -0.4
Ccdc38Q8CDN8 Gm16348-202ENSMUST00000146654 2385 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc38Q8CDN8 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc38Q8CDN8 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc38Q8CDN8 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Ccdc38Q8CDN8 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc38Q8CDN8 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc38Q8CDN8 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Ccdc38Q8CDN8 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC12.55□□□□□ -0.4
Ccdc38Q8CDN8 Gm14277-201ENSMUST00000121195 360 ntBASIC12.55□□□□□ -0.4
Ccdc38Q8CDN8 Gm15329-201ENSMUST00000121408 155 ntBASIC12.55□□□□□ -0.4
Ccdc38Q8CDN8 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC12.55□□□□□ -0.4
Ccdc38Q8CDN8 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Ccdc38Q8CDN8 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC12.55□□□□□ -0.4
Ccdc38Q8CDN8 Gm27341-201ENSMUST00000183570 106 ntBASIC12.55□□□□□ -0.4
Ccdc38Q8CDN8 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Ccdc38Q8CDN8 Gm28450-201ENSMUST00000187349 638 ntBASIC12.55□□□□□ -0.4
Ccdc38Q8CDN8 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc38Q8CDN8 Gm44506-201ENSMUST00000206278 965 ntBASIC12.55□□□□□ -0.4
Ccdc38Q8CDN8 Gm5996-201ENSMUST00000211110 718 ntBASIC12.55□□□□□ -0.4
Ccdc38Q8CDN8 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC12.55□□□□□ -0.4
Ccdc38Q8CDN8 CT009713.8-201ENSMUST00000225448 560 ntBASIC12.55□□□□□ -0.4
Ccdc38Q8CDN8 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc38Q8CDN8 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc38Q8CDN8 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Ccdc38Q8CDN8 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc38Q8CDN8 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc38Q8CDN8 AC127597.1-201ENSMUST00000225697 5711 ntBASIC12.55□□□□□ -0.4
Ccdc38Q8CDN8 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC12.55□□□□□ -0.4
Ccdc38Q8CDN8 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC12.55□□□□□ -0.4
Ccdc38Q8CDN8 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Ccdc38Q8CDN8 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc38Q8CDN8 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc38Q8CDN8 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc38Q8CDN8 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc38Q8CDN8 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc38Q8CDN8 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc38Q8CDN8 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Ccdc38Q8CDN8 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc38Q8CDN8 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc38Q8CDN8 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc38Q8CDN8 AC122273.1-201ENSMUST00000213634 2327 ntBASIC12.55□□□□□ -0.4
Ccdc38Q8CDN8 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc38Q8CDN8 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc38Q8CDN8 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc38Q8CDN8 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Ccdc38Q8CDN8 AC174797.1-201ENSMUST00000224339 1649 ntBASIC12.55□□□□□ -0.4
Ccdc38Q8CDN8 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc38Q8CDN8 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Ccdc38Q8CDN8 Sfxn5-201ENSMUST00000045846 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc38Q8CDN8 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc38Q8CDN8 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc38Q8CDN8 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc38Q8CDN8 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Ccdc38Q8CDN8 Gm18642-201ENSMUST00000206642 1400 ntBASIC12.54□□□□□ -0.4
Ccdc38Q8CDN8 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc38Q8CDN8 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc38Q8CDN8 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
Ccdc38Q8CDN8 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Ccdc38Q8CDN8 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Ccdc38Q8CDN8 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc38Q8CDN8 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc38Q8CDN8 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 70.9 ms