Protein–RNA interactions for Protein: Q6IRU2

Tpm4, Tropomyosin alpha-4 chain, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm4Q6IRU2 5430419D17Rik-203ENSMUST00000208921 7948 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Tpm4Q6IRU2 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Tpm4Q6IRU2 Tcaf1-202ENSMUST00000045140 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tpm4Q6IRU2 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Tpm4Q6IRU2 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tpm4Q6IRU2 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.39
Tpm4Q6IRU2 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Tpm4Q6IRU2 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Tpm4Q6IRU2 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
Tpm4Q6IRU2 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tpm4Q6IRU2 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tpm4Q6IRU2 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tpm4Q6IRU2 Gpr149-201ENSMUST00000058535 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tpm4Q6IRU2 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Tpm4Q6IRU2 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Tpm4Q6IRU2 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tpm4Q6IRU2 Gm14130-201ENSMUST00000118417 987 ntBASIC12.58□□□□□ -0.4
Tpm4Q6IRU2 Gm13996-201ENSMUST00000118456 430 ntBASIC12.58□□□□□ -0.4
Tpm4Q6IRU2 Gm12715-201ENSMUST00000121430 1128 ntBASIC12.58□□□□□ -0.4
Tpm4Q6IRU2 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tpm4Q6IRU2 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Tpm4Q6IRU2 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Tpm4Q6IRU2 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tpm4Q6IRU2 Gm8815-201ENSMUST00000173809 620 ntBASIC12.58□□□□□ -0.4
Tpm4Q6IRU2 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Tpm4Q6IRU2 Gm25890-201ENSMUST00000177643 165 ntBASIC12.58□□□□□ -0.4
Tpm4Q6IRU2 Rnu1b2-201ENSMUST00000178073 165 ntBASIC12.58□□□□□ -0.4
Tpm4Q6IRU2 Rnu1b1-201ENSMUST00000178250 165 ntBASIC12.58□□□□□ -0.4
Tpm4Q6IRU2 Gm22614-201ENSMUST00000178300 165 ntBASIC12.58□□□□□ -0.4
Tpm4Q6IRU2 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tpm4Q6IRU2 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.58□□□□□ -0.4
Tpm4Q6IRU2 Gm37122-201ENSMUST00000195313 1567 ntBASIC12.58□□□□□ -0.4
Tpm4Q6IRU2 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Tpm4Q6IRU2 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC12.58□□□□□ -0.4
Tpm4Q6IRU2 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC12.58□□□□□ -0.4
Tpm4Q6IRU2 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tpm4Q6IRU2 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tpm4Q6IRU2 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tpm4Q6IRU2 Gm22042-201ENSMUST00000082989 165 ntBASIC12.58□□□□□ -0.4
Tpm4Q6IRU2 Gm26110-201ENSMUST00000083971 165 ntBASIC12.58□□□□□ -0.4
Tpm4Q6IRU2 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tpm4Q6IRU2 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tpm4Q6IRU2 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC12.58□□□□□ -0.4
Tpm4Q6IRU2 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Tpm4Q6IRU2 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC12.58□□□□□ -0.4
Tpm4Q6IRU2 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Tpm4Q6IRU2 Adgrv1-214ENSMUST00000224088 1492 ntBASIC12.58□□□□□ -0.4
Tpm4Q6IRU2 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tpm4Q6IRU2 Myo5a-206ENSMUST00000136731 6480 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
Tpm4Q6IRU2 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tpm4Q6IRU2 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tpm4Q6IRU2 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tpm4Q6IRU2 Gm45828-201ENSMUST00000206938 1836 ntBASIC12.58□□□□□ -0.4
Tpm4Q6IRU2 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Tpm4Q6IRU2 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Tpm4Q6IRU2 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tpm4Q6IRU2 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tpm4Q6IRU2 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tpm4Q6IRU2 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tpm4Q6IRU2 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Tpm4Q6IRU2 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Tpm4Q6IRU2 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Tpm4Q6IRU2 Nlgn3-201ENSMUST00000065858 8465 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tpm4Q6IRU2 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tpm4Q6IRU2 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Tpm4Q6IRU2 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Tpm4Q6IRU2 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC12.57□□□□□ -0.4
Tpm4Q6IRU2 Gm12012-201ENSMUST00000118857 1066 ntBASIC12.57□□□□□ -0.4
Tpm4Q6IRU2 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Tpm4Q6IRU2 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Tpm4Q6IRU2 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tpm4Q6IRU2 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC12.57□□□□□ -0.4
Tpm4Q6IRU2 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Tpm4Q6IRU2 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Tpm4Q6IRU2 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Tpm4Q6IRU2 Gm5852-201ENSMUST00000194119 1021 ntBASIC12.57□□□□□ -0.4
Tpm4Q6IRU2 Gm6439-201ENSMUST00000199849 862 ntBASIC12.57□□□□□ -0.4
Tpm4Q6IRU2 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Tpm4Q6IRU2 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC12.57□□□□□ -0.4
Tpm4Q6IRU2 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC12.57□□□□□ -0.4
Tpm4Q6IRU2 AC160929.1-201ENSMUST00000221247 415 ntBASIC12.57□□□□□ -0.4
Tpm4Q6IRU2 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tpm4Q6IRU2 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Tpm4Q6IRU2 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Tpm4Q6IRU2 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Tpm4Q6IRU2 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tpm4Q6IRU2 Crry-ps-201ENSMUST00000079090 1309 ntBASIC12.57□□□□□ -0.4
Tpm4Q6IRU2 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tpm4Q6IRU2 Atad5-201ENSMUST00000017694 7272 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tpm4Q6IRU2 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tpm4Q6IRU2 Gm37333-201ENSMUST00000192904 2251 ntBASIC12.57□□□□□ -0.4
Tpm4Q6IRU2 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Tpm4Q6IRU2 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Tpm4Q6IRU2 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tpm4Q6IRU2 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
Tpm4Q6IRU2 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Tpm4Q6IRU2 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tpm4Q6IRU2 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tpm4Q6IRU2 Gm23596-201ENSMUST00000104304 132 ntBASIC12.56□□□□□ -0.4
Tpm4Q6IRU2 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms