Protein–RNA interactions for Protein: Q3US59

Gm28047, Predicted gene, 28047, mousemouse

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28047Q3US59 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Gm28047Q3US59 Gm37651-201ENSMUST00000194679 1494 ntBASIC12.79□□□□□ -0.36
Gm28047Q3US59 AC166836.1-201ENSMUST00000219933 1795 ntBASIC12.79□□□□□ -0.36
Gm28047Q3US59 AC124732.3-201ENSMUST00000221835 1765 ntBASIC12.79□□□□□ -0.36
Gm28047Q3US59 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm28047Q3US59 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm28047Q3US59 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm28047Q3US59 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Gm28047Q3US59 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Gm28047Q3US59 Gm15528-201ENSMUST00000117821 864 ntBASIC12.79□□□□□ -0.36
Gm28047Q3US59 Gm15352-201ENSMUST00000118696 270 ntBASIC12.79□□□□□ -0.36
Gm28047Q3US59 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC12.79□□□□□ -0.36
Gm28047Q3US59 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC12.79□□□□□ -0.36
Gm28047Q3US59 Gm25492-201ENSMUST00000157383 129 ntBASIC12.79□□□□□ -0.36
Gm28047Q3US59 Gm37284-201ENSMUST00000193607 539 ntBASIC12.79□□□□□ -0.36
Gm28047Q3US59 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC12.79□□□□□ -0.36
Gm28047Q3US59 Gm44136-201ENSMUST00000203819 1106 ntBASIC12.79□□□□□ -0.36
Gm28047Q3US59 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC12.79□□□□□ -0.36
Gm28047Q3US59 AC122408.1-201ENSMUST00000218949 218 ntBASIC12.79□□□□□ -0.36
Gm28047Q3US59 Gm9826-201ENSMUST00000029124 1299 ntBASIC12.79□□□□□ -0.36
Gm28047Q3US59 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm28047Q3US59 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm28047Q3US59 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm28047Q3US59 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Gm28047Q3US59 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm28047Q3US59 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC12.79□□□□□ -0.36
Gm28047Q3US59 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm28047Q3US59 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC12.79□□□□□ -0.36
Gm28047Q3US59 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm28047Q3US59 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Gm28047Q3US59 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm28047Q3US59 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Gm28047Q3US59 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Gm28047Q3US59 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm28047Q3US59 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm28047Q3US59 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Gm28047Q3US59 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm28047Q3US59 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC12.79□□□□□ -0.36
Gm28047Q3US59 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm28047Q3US59 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Gm28047Q3US59 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm28047Q3US59 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Gm28047Q3US59 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm28047Q3US59 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Gm28047Q3US59 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Gm28047Q3US59 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Gm28047Q3US59 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm28047Q3US59 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm28047Q3US59 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm28047Q3US59 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm28047Q3US59 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC12.78□□□□□ -0.36
Gm28047Q3US59 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm28047Q3US59 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm28047Q3US59 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm28047Q3US59 Gm15615-201ENSMUST00000118876 198 ntBASIC12.78□□□□□ -0.36
Gm28047Q3US59 Gm11573-201ENSMUST00000119956 394 ntBASIC12.78□□□□□ -0.36
Gm28047Q3US59 Gm11836-201ENSMUST00000121022 441 ntBASIC12.78□□□□□ -0.36
Gm28047Q3US59 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC12.78□□□□□ -0.36
Gm28047Q3US59 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm28047Q3US59 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC12.78□□□□□ -0.36
Gm28047Q3US59 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC12.78□□□□□ -0.36
Gm28047Q3US59 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC12.78□□□□□ -0.36
Gm28047Q3US59 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm28047Q3US59 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC12.78□□□□□ -0.36
Gm28047Q3US59 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Gm28047Q3US59 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Gm28047Q3US59 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Gm28047Q3US59 Gm18056-201ENSMUST00000207670 568 ntBASIC12.78□□□□□ -0.36
Gm28047Q3US59 Gm18061-201ENSMUST00000208350 562 ntBASIC12.78□□□□□ -0.36
Gm28047Q3US59 Gm18063-201ENSMUST00000208529 568 ntBASIC12.78□□□□□ -0.36
Gm28047Q3US59 Gm18052-201ENSMUST00000208750 559 ntBASIC12.78□□□□□ -0.36
Gm28047Q3US59 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC12.78□□□□□ -0.36
Gm28047Q3US59 Abhd11os-203ENSMUST00000222613 363 ntBASIC12.78□□□□□ -0.36
Gm28047Q3US59 AC154290.1-201ENSMUST00000223786 1240 ntBASIC12.78□□□□□ -0.36
Gm28047Q3US59 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm28047Q3US59 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm28047Q3US59 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm28047Q3US59 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Gm28047Q3US59 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Gm28047Q3US59 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm28047Q3US59 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Gm28047Q3US59 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm28047Q3US59 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm28047Q3US59 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Gm28047Q3US59 Gm7993-201ENSMUST00000200970 1384 ntBASIC12.78□□□□□ -0.36
Gm28047Q3US59 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm28047Q3US59 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm28047Q3US59 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Gm28047Q3US59 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC12.78□□□□□ -0.36
Gm28047Q3US59 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Gm28047Q3US59 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm28047Q3US59 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Gm28047Q3US59 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Gm28047Q3US59 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Gm28047Q3US59 Gm10699-201ENSMUST00000098916 2130 ntBASIC12.77□□□□□ -0.36
Gm28047Q3US59 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Gm28047Q3US59 Gm43152-201ENSMUST00000202495 1638 ntBASIC12.77□□□□□ -0.36
Gm28047Q3US59 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Gm28047Q3US59 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Gm28047Q3US59 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms