Protein–RNA interactions for Protein: Q2MKA5

Chrna5, Neuronal acetylcholine receptor subunit alpha-5, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna5Q2MKA5 Ormdl2-203ENSMUST00000219215 1051 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chrna5Q2MKA5 AC107752.1-201ENSMUST00000219362 469 ntBASIC13.35□□□□□ -0.27
Chrna5Q2MKA5 Fopnl-202ENSMUST00000120707 1414 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Chrna5Q2MKA5 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Chrna5Q2MKA5 Gm44153-201ENSMUST00000204162 1580 ntBASIC13.35□□□□□ -0.27
Chrna5Q2MKA5 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chrna5Q2MKA5 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
Chrna5Q2MKA5 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Chrna5Q2MKA5 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chrna5Q2MKA5 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chrna5Q2MKA5 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Chrna5Q2MKA5 Gm17836-201ENSMUST00000191976 1302 ntBASIC13.35□□□□□ -0.27
Chrna5Q2MKA5 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chrna5Q2MKA5 Acnat1-201ENSMUST00000095086 1499 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chrna5Q2MKA5 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chrna5Q2MKA5 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Chrna5Q2MKA5 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Chrna5Q2MKA5 Gm5159-201ENSMUST00000212733 1652 ntBASIC13.34□□□□□ -0.27
Chrna5Q2MKA5 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chrna5Q2MKA5 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chrna5Q2MKA5 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chrna5Q2MKA5 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chrna5Q2MKA5 Gm44831-201ENSMUST00000208469 2989 ntBASIC13.34□□□□□ -0.27
Chrna5Q2MKA5 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chrna5Q2MKA5 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chrna5Q2MKA5 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chrna5Q2MKA5 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chrna5Q2MKA5 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chrna5Q2MKA5 Gm6755-201ENSMUST00000100598 864 ntBASIC13.34□□□□□ -0.27
Chrna5Q2MKA5 Gm6740-201ENSMUST00000100617 864 ntBASIC13.34□□□□□ -0.27
Chrna5Q2MKA5 Trbv31-201ENSMUST00000103300 334 ntAPPRIS ALT2 BASIC13.34□□□□□ -0.27
Chrna5Q2MKA5 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Chrna5Q2MKA5 Skint7-202ENSMUST00000106568 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chrna5Q2MKA5 Olfr1263-201ENSMUST00000111507 1029 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Chrna5Q2MKA5 Nup188-202ENSMUST00000113634 534 ntTSL 2 BASIC13.34□□□□□ -0.27
Chrna5Q2MKA5 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC13.34□□□□□ -0.27
Chrna5Q2MKA5 Gm16209-201ENSMUST00000118457 627 ntBASIC13.34□□□□□ -0.27
Chrna5Q2MKA5 Cdk1-202ENSMUST00000119827 1253 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Chrna5Q2MKA5 Gm10171-201ENSMUST00000126220 628 ntBASIC13.34□□□□□ -0.27
Chrna5Q2MKA5 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC13.34□□□□□ -0.27
Chrna5Q2MKA5 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Chrna5Q2MKA5 Gm16305-201ENSMUST00000140747 556 ntBASIC13.34□□□□□ -0.27
Chrna5Q2MKA5 Gm5808-201ENSMUST00000178090 357 ntBASIC13.34□□□□□ -0.27
Chrna5Q2MKA5 9530085P06Rik-201ENSMUST00000182121 827 ntBASIC13.34□□□□□ -0.27
Chrna5Q2MKA5 Gm7765-201ENSMUST00000182585 974 ntBASIC13.34□□□□□ -0.27
Chrna5Q2MKA5 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC13.34□□□□□ -0.27
Chrna5Q2MKA5 Gm6518-201ENSMUST00000208450 342 ntBASIC13.34□□□□□ -0.27
Chrna5Q2MKA5 Gm45310-201ENSMUST00000210436 275 ntBASIC13.34□□□□□ -0.27
Chrna5Q2MKA5 Defb29-201ENSMUST00000060598 462 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chrna5Q2MKA5 Gm10233-201ENSMUST00000089275 628 ntBASIC13.34□□□□□ -0.27
Chrna5Q2MKA5 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chrna5Q2MKA5 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chrna5Q2MKA5 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC13.34□□□□□ -0.27
Chrna5Q2MKA5 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chrna5Q2MKA5 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.34□□□□□ -0.27
Chrna5Q2MKA5 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chrna5Q2MKA5 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chrna5Q2MKA5 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chrna5Q2MKA5 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chrna5Q2MKA5 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chrna5Q2MKA5 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Chrna5Q2MKA5 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chrna5Q2MKA5 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
Chrna5Q2MKA5 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
Chrna5Q2MKA5 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Chrna5Q2MKA5 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Chrna5Q2MKA5 Gm42858-201ENSMUST00000202512 1704 ntBASIC13.33□□□□□ -0.27
Chrna5Q2MKA5 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Chrna5Q2MKA5 Cxcl11-201ENSMUST00000077820 1581 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Chrna5Q2MKA5 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chrna5Q2MKA5 Gm43760-201ENSMUST00000202120 3015 ntBASIC13.33□□□□□ -0.28
Chrna5Q2MKA5 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chrna5Q2MKA5 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Chrna5Q2MKA5 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chrna5Q2MKA5 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Chrna5Q2MKA5 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chrna5Q2MKA5 Gm22495-201ENSMUST00000104492 126 ntBASIC13.33□□□□□ -0.28
Chrna5Q2MKA5 Gm13286-201ENSMUST00000117750 537 ntBASIC13.33□□□□□ -0.28
Chrna5Q2MKA5 Treml4-203ENSMUST00000136272 811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chrna5Q2MKA5 Tnni1-204ENSMUST00000139986 651 ntTSL 5 BASIC13.33□□□□□ -0.28
Chrna5Q2MKA5 Gm13412-201ENSMUST00000150621 677 ntTSL 3 BASIC13.33□□□□□ -0.28
Chrna5Q2MKA5 Treml4-206ENSMUST00000154335 838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chrna5Q2MKA5 Gm23582-201ENSMUST00000158530 139 ntBASIC13.33□□□□□ -0.28
Chrna5Q2MKA5 Gm6291-201ENSMUST00000179994 309 ntBASIC13.33□□□□□ -0.28
Chrna5Q2MKA5 Milr1-206ENSMUST00000182896 918 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chrna5Q2MKA5 Milr1-207ENSMUST00000182908 811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chrna5Q2MKA5 Gm28671-201ENSMUST00000187036 692 ntBASIC13.33□□□□□ -0.28
Chrna5Q2MKA5 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Chrna5Q2MKA5 Clec2h-202ENSMUST00000204416 386 ntTSL 3 BASIC13.33□□□□□ -0.28
Chrna5Q2MKA5 Gm44939-201ENSMUST00000206939 814 ntTSL 3 BASIC13.33□□□□□ -0.28
Chrna5Q2MKA5 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC13.33□□□□□ -0.28
Chrna5Q2MKA5 AC155245.1-201ENSMUST00000222266 1804 ntBASIC13.33□□□□□ -0.28
Chrna5Q2MKA5 AC090962.2-201ENSMUST00000225064 1801 ntBASIC13.33□□□□□ -0.28
Chrna5Q2MKA5 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Chrna5Q2MKA5 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chrna5Q2MKA5 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chrna5Q2MKA5 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chrna5Q2MKA5 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chrna5Q2MKA5 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chrna5Q2MKA5 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 75.9 ms