Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC9.36□□□□□ -0.91
Tff1Q08423 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Tff1Q08423 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Tff1Q08423 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Tff1Q08423 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC9.36□□□□□ -0.91
Tff1Q08423 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Tff1Q08423 Gm5982-201ENSMUST00000196234 512 ntBASIC9.36□□□□□ -0.91
Tff1Q08423 Gm42629-201ENSMUST00000199063 1102 ntBASIC9.36□□□□□ -0.91
Tff1Q08423 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC9.36□□□□□ -0.91
Tff1Q08423 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Tff1Q08423 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC9.36□□□□□ -0.91
Tff1Q08423 Gm2553-201ENSMUST00000215986 605 ntBASIC9.36□□□□□ -0.91
Tff1Q08423 Gm18065-201ENSMUST00000221395 526 ntBASIC9.36□□□□□ -0.91
Tff1Q08423 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Tff1Q08423 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Tff1Q08423 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Tff1Q08423 Dzip1l-204ENSMUST00000112886 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Tff1Q08423 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Tff1Q08423 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Tff1Q08423 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Tff1Q08423 Gm26660-202ENSMUST00000223620 4112 ntBASIC9.36□□□□□ -0.91
Tff1Q08423 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Tff1Q08423 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Tff1Q08423 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Tff1Q08423 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC9.36□□□□□ -0.91
Tff1Q08423 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Tff1Q08423 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC9.36□□□□□ -0.91
Tff1Q08423 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC9.36□□□□□ -0.91
Tff1Q08423 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC9.36□□□□□ -0.91
Tff1Q08423 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Tff1Q08423 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Tff1Q08423 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Tff1Q08423 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Tff1Q08423 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Tff1Q08423 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Tff1Q08423 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC9.36□□□□□ -0.91
Tff1Q08423 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Tff1Q08423 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC9.36□□□□□ -0.91
Tff1Q08423 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Tff1Q08423 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC9.36□□□□□ -0.91
Tff1Q08423 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Tff1Q08423 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Tff1Q08423 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Tff1Q08423 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Tff1Q08423 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Tff1Q08423 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Tff1Q08423 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Tff1Q08423 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC9.35□□□□□ -0.91
Tff1Q08423 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Tff1Q08423 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC9.35□□□□□ -0.91
Tff1Q08423 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Tff1Q08423 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC9.35□□□□□ -0.91
Tff1Q08423 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Tff1Q08423 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Tff1Q08423 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Tff1Q08423 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Tff1Q08423 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Tff1Q08423 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Tff1Q08423 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC9.35□□□□□ -0.91
Tff1Q08423 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Tff1Q08423 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC9.35□□□□□ -0.91
Tff1Q08423 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Tff1Q08423 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC9.35□□□□□ -0.91
Tff1Q08423 Gm14460-201ENSMUST00000121511 639 ntBASIC9.35□□□□□ -0.91
Tff1Q08423 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC9.35□□□□□ -0.91
Tff1Q08423 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC9.35□□□□□ -0.91
Tff1Q08423 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC9.35□□□□□ -0.91
Tff1Q08423 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Tff1Q08423 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Tff1Q08423 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Tff1Q08423 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC9.35□□□□□ -0.91
Tff1Q08423 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC9.35□□□□□ -0.91
Tff1Q08423 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC9.35□□□□□ -0.91
Tff1Q08423 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC9.35□□□□□ -0.91
Tff1Q08423 Gm37122-201ENSMUST00000195313 1567 ntBASIC9.35□□□□□ -0.91
Tff1Q08423 Gm8365-201ENSMUST00000197334 648 ntBASIC9.35□□□□□ -0.91
Tff1Q08423 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC9.35□□□□□ -0.91
Tff1Q08423 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC9.35□□□□□ -0.91
Tff1Q08423 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Tff1Q08423 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Tff1Q08423 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Tff1Q08423 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Tff1Q08423 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Tff1Q08423 Gm1840-201ENSMUST00000051687 1432 ntBASIC9.35□□□□□ -0.91
Tff1Q08423 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Tff1Q08423 Gm44663-201ENSMUST00000206898 3150 ntBASIC9.35□□□□□ -0.91
Tff1Q08423 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Tff1Q08423 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Tff1Q08423 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Tff1Q08423 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Tff1Q08423 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Tff1Q08423 Plpbp-203ENSMUST00000209525 5767 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Tff1Q08423 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Tff1Q08423 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC9.35□□□□□ -0.91
Tff1Q08423 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Tff1Q08423 Gm6580-201ENSMUST00000117504 1357 ntBASIC9.35□□□□□ -0.91
Tff1Q08423 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Tff1Q08423 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Tff1Q08423 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Tff1Q08423 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms