Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC12.17□□□□□ -0.46
Col9a2Q07643 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Col9a2Q07643 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col9a2Q07643 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col9a2Q07643 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col9a2Q07643 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Col9a2Q07643 AC090962.2-201ENSMUST00000225064 1801 ntBASIC12.17□□□□□ -0.46
Col9a2Q07643 Mir181d-201ENSMUST00000102383 72 ntBASIC12.17□□□□□ -0.46
Col9a2Q07643 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col9a2Q07643 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col9a2Q07643 Gm14592-201ENSMUST00000117201 560 ntBASIC12.17□□□□□ -0.46
Col9a2Q07643 Gm12783-201ENSMUST00000121425 397 ntBASIC12.17□□□□□ -0.46
Col9a2Q07643 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col9a2Q07643 Gm17221-201ENSMUST00000163909 481 ntBASIC12.17□□□□□ -0.46
Col9a2Q07643 Gm17073-201ENSMUST00000168069 556 ntBASIC12.17□□□□□ -0.46
Col9a2Q07643 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col9a2Q07643 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Col9a2Q07643 Gm20781-201ENSMUST00000193154 693 ntBASIC12.17□□□□□ -0.46
Col9a2Q07643 Gm21736-201ENSMUST00000195399 693 ntBASIC12.17□□□□□ -0.46
Col9a2Q07643 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col9a2Q07643 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col9a2Q07643 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC12.17□□□□□ -0.46
Col9a2Q07643 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col9a2Q07643 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Col9a2Q07643 AC159196.1-201ENSMUST00000225524 377 ntBASIC12.17□□□□□ -0.46
Col9a2Q07643 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Col9a2Q07643 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col9a2Q07643 Gm8420-201ENSMUST00000097103 598 ntBASIC12.17□□□□□ -0.46
Col9a2Q07643 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col9a2Q07643 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC12.17□□□□□ -0.46
Col9a2Q07643 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col9a2Q07643 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col9a2Q07643 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col9a2Q07643 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col9a2Q07643 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Col9a2Q07643 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col9a2Q07643 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col9a2Q07643 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col9a2Q07643 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC12.17□□□□□ -0.46
Col9a2Q07643 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col9a2Q07643 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col9a2Q07643 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col9a2Q07643 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col9a2Q07643 Gm13135-201ENSMUST00000117628 3121 ntBASIC12.17□□□□□ -0.46
Col9a2Q07643 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col9a2Q07643 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.17□□□□□ -0.46
Col9a2Q07643 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Col9a2Q07643 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col9a2Q07643 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col9a2Q07643 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Col9a2Q07643 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col9a2Q07643 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col9a2Q07643 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col9a2Q07643 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Col9a2Q07643 AC167565.1-201ENSMUST00000226980 1833 ntBASIC12.16□□□□□ -0.46
Col9a2Q07643 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC12.16□□□□□ -0.46
Col9a2Q07643 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col9a2Q07643 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col9a2Q07643 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col9a2Q07643 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col9a2Q07643 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Col9a2Q07643 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col9a2Q07643 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col9a2Q07643 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Col9a2Q07643 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col9a2Q07643 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col9a2Q07643 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col9a2Q07643 Gm14398-201ENSMUST00000117287 1073 ntBASIC12.16□□□□□ -0.46
Col9a2Q07643 Gm11578-201ENSMUST00000118530 459 ntBASIC12.16□□□□□ -0.46
Col9a2Q07643 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col9a2Q07643 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col9a2Q07643 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col9a2Q07643 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Col9a2Q07643 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col9a2Q07643 Gm20443-201ENSMUST00000173840 735 ntTSL 3 BASIC12.16□□□□□ -0.46
Col9a2Q07643 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC12.16□□□□□ -0.46
Col9a2Q07643 Gm3433-201ENSMUST00000210149 1058 ntBASIC12.16□□□□□ -0.46
Col9a2Q07643 Gm6390-201ENSMUST00000215034 589 ntBASIC12.16□□□□□ -0.46
Col9a2Q07643 AC154435.1-201ENSMUST00000223938 959 ntBASIC12.16□□□□□ -0.46
Col9a2Q07643 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col9a2Q07643 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col9a2Q07643 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col9a2Q07643 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col9a2Q07643 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col9a2Q07643 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col9a2Q07643 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
Col9a2Q07643 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC12.16□□□□□ -0.46
Col9a2Q07643 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col9a2Q07643 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col9a2Q07643 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
Col9a2Q07643 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col9a2Q07643 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col9a2Q07643 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col9a2Q07643 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Col9a2Q07643 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col9a2Q07643 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col9a2Q07643 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col9a2Q07643 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Col9a2Q07643 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col9a2Q07643 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms