Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Cdx4Q07424 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Cdx4Q07424 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Cdx4Q07424 Gm12029-201ENSMUST00000120073 832 ntBASIC8.74□□□□□ -1.01
Cdx4Q07424 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC8.74□□□□□ -1.01
Cdx4Q07424 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Cdx4Q07424 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Cdx4Q07424 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC8.74□□□□□ -1.01
Cdx4Q07424 Gm15881-201ENSMUST00000148792 942 ntBASIC8.74□□□□□ -1.01
Cdx4Q07424 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC8.74□□□□□ -1.01
Cdx4Q07424 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC8.74□□□□□ -1.01
Cdx4Q07424 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC8.74□□□□□ -1.01
Cdx4Q07424 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC8.74□□□□□ -1.01
Cdx4Q07424 Gm5714-201ENSMUST00000197343 566 ntBASIC8.74□□□□□ -1.01
Cdx4Q07424 Mir7686-201ENSMUST00000200604 57 ntBASIC8.74□□□□□ -1.01
Cdx4Q07424 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC8.74□□□□□ -1.01
Cdx4Q07424 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC8.74□□□□□ -1.01
Cdx4Q07424 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
Cdx4Q07424 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Cdx4Q07424 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC8.74□□□□□ -1.01
Cdx4Q07424 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC8.74□□□□□ -1.01
Cdx4Q07424 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC8.74□□□□□ -1.01
Cdx4Q07424 CT030637.1-201ENSMUST00000228016 669 ntBASIC8.74□□□□□ -1.01
Cdx4Q07424 Gm9826-201ENSMUST00000029124 1299 ntBASIC8.74□□□□□ -1.01
Cdx4Q07424 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Cdx4Q07424 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Cdx4Q07424 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
Cdx4Q07424 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Cdx4Q07424 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Cdx4Q07424 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Cdx4Q07424 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Cdx4Q07424 Bcl2l11-205ENSMUST00000110341 5036 ntAPPRIS P4 TSL 1 (best) BASIC8.74□□□□□ -1.01
Cdx4Q07424 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC8.74□□□□□ -1.01
Cdx4Q07424 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Cdx4Q07424 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Cdx4Q07424 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Cdx4Q07424 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Cdx4Q07424 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Cdx4Q07424 Clasp1-208ENSMUST00000187713 5367 ntAPPRIS ALT2 TSL 5 BASIC8.74□□□□□ -1.01
Cdx4Q07424 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Cdx4Q07424 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Cdx4Q07424 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Cdx4Q07424 Morc2a-201ENSMUST00000093389 5085 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Cdx4Q07424 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Cdx4Q07424 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC8.73□□□□□ -1.01
Cdx4Q07424 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC8.73□□□□□ -1.01
Cdx4Q07424 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Cdx4Q07424 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC8.73□□□□□ -1.01
Cdx4Q07424 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC8.73□□□□□ -1.01
Cdx4Q07424 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Cdx4Q07424 Gm43773-201ENSMUST00000198548 2162 ntBASIC8.73□□□□□ -1.01
Cdx4Q07424 Son-201ENSMUST00000114036 7945 ntTSL 5 BASIC8.73□□□□□ -1.01
Cdx4Q07424 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
Cdx4Q07424 Bsn-201ENSMUST00000035208 15938 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
Cdx4Q07424 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Cdx4Q07424 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Cdx4Q07424 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC8.73□□□□□ -1.01
Cdx4Q07424 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Cdx4Q07424 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
Cdx4Q07424 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
Cdx4Q07424 Adcy7-201ENSMUST00000098521 5937 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Cdx4Q07424 Ubr1-201ENSMUST00000028728 7768 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Cdx4Q07424 Lrat-201ENSMUST00000029632 5351 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Cdx4Q07424 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Cdx4Q07424 Aen-203ENSMUST00000107425 4956 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
Cdx4Q07424 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Cdx4Q07424 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Cdx4Q07424 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
Cdx4Q07424 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
Cdx4Q07424 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
Cdx4Q07424 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC8.73□□□□□ -1.01
Cdx4Q07424 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Cdx4Q07424 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC8.73□□□□□ -1.01
Cdx4Q07424 Gm14314-201ENSMUST00000118225 1015 ntBASIC8.73□□□□□ -1.01
Cdx4Q07424 Gm15566-201ENSMUST00000121130 590 ntBASIC8.73□□□□□ -1.01
Cdx4Q07424 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC8.73□□□□□ -1.01
Cdx4Q07424 Mup-ps26-201ENSMUST00000121751 202 ntBASIC8.73□□□□□ -1.01
Cdx4Q07424 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Cdx4Q07424 Gm6397-201ENSMUST00000161973 1069 ntBASIC8.73□□□□□ -1.01
Cdx4Q07424 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Cdx4Q07424 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC8.73□□□□□ -1.01
Cdx4Q07424 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
Cdx4Q07424 Gm4310-201ENSMUST00000177847 889 ntBASIC8.73□□□□□ -1.01
Cdx4Q07424 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Cdx4Q07424 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Cdx4Q07424 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC8.73□□□□□ -1.01
Cdx4Q07424 Gm5852-201ENSMUST00000194119 1021 ntBASIC8.73□□□□□ -1.01
Cdx4Q07424 Gm43002-201ENSMUST00000200310 155 ntBASIC8.73□□□□□ -1.01
Cdx4Q07424 Gm5051-201ENSMUST00000204085 485 ntBASIC8.73□□□□□ -1.01
Cdx4Q07424 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC8.73□□□□□ -1.01
Cdx4Q07424 Gm44126-201ENSMUST00000204831 514 ntBASIC8.73□□□□□ -1.01
Cdx4Q07424 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
Cdx4Q07424 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC8.73□□□□□ -1.01
Cdx4Q07424 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC8.73□□□□□ -1.01
Cdx4Q07424 Gm7395-201ENSMUST00000216059 1045 ntBASIC8.73□□□□□ -1.01
Cdx4Q07424 Gm7940-201ENSMUST00000218195 769 ntBASIC8.73□□□□□ -1.01
Cdx4Q07424 Gm18065-201ENSMUST00000221395 526 ntBASIC8.73□□□□□ -1.01
Cdx4Q07424 CT009713.8-202ENSMUST00000224732 385 ntBASIC8.73□□□□□ -1.01
Cdx4Q07424 AC115122.1-201ENSMUST00000224850 1040 ntBASIC8.73□□□□□ -1.01
Cdx4Q07424 AC154849.4-201ENSMUST00000224868 365 ntBASIC8.73□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 228.1 ms