Protein–RNA interactions for Protein: Q04683

Cxcr5, C-X-C chemokine receptor type 5, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr5Q04683 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Cxcr5Q04683 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC10.68□□□□□ -0.7
Cxcr5Q04683 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC10.68□□□□□ -0.7
Cxcr5Q04683 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cxcr5Q04683 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cxcr5Q04683 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC10.68□□□□□ -0.7
Cxcr5Q04683 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cxcr5Q04683 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Cxcr5Q04683 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC10.68□□□□□ -0.7
Cxcr5Q04683 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cxcr5Q04683 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cxcr5Q04683 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cxcr5Q04683 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cxcr5Q04683 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC10.68□□□□□ -0.7
Cxcr5Q04683 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cxcr5Q04683 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cxcr5Q04683 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cxcr5Q04683 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cxcr5Q04683 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cxcr5Q04683 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cxcr5Q04683 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Cxcr5Q04683 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Cxcr5Q04683 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cxcr5Q04683 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cxcr5Q04683 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC10.68□□□□□ -0.7
Cxcr5Q04683 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Cxcr5Q04683 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cxcr5Q04683 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cxcr5Q04683 Gm24074-201ENSMUST00000158178 260 ntBASIC10.68□□□□□ -0.7
Cxcr5Q04683 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Cxcr5Q04683 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC10.68□□□□□ -0.7
Cxcr5Q04683 Gm17376-201ENSMUST00000166016 84 ntBASIC10.68□□□□□ -0.7
Cxcr5Q04683 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Cxcr5Q04683 H2-Q3-201ENSMUST00000172583 608 ntBASIC10.68□□□□□ -0.7
Cxcr5Q04683 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Cxcr5Q04683 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC10.68□□□□□ -0.7
Cxcr5Q04683 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Cxcr5Q04683 Gm37597-201ENSMUST00000191853 382 ntBASIC10.68□□□□□ -0.7
Cxcr5Q04683 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC10.68□□□□□ -0.7
Cxcr5Q04683 Gm7003-201ENSMUST00000195089 312 ntBASIC10.68□□□□□ -0.7
Cxcr5Q04683 Gm9678-201ENSMUST00000198979 1149 ntBASIC10.68□□□□□ -0.7
Cxcr5Q04683 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Cxcr5Q04683 AC159002.1-201ENSMUST00000226714 924 ntBASIC10.68□□□□□ -0.7
Cxcr5Q04683 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cxcr5Q04683 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cxcr5Q04683 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cxcr5Q04683 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cxcr5Q04683 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Cxcr5Q04683 Gm37031-201ENSMUST00000195487 2530 ntBASIC10.68□□□□□ -0.7
Cxcr5Q04683 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Cxcr5Q04683 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC10.68□□□□□ -0.7
Cxcr5Q04683 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Cxcr5Q04683 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC10.68□□□□□ -0.7
Cxcr5Q04683 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Cxcr5Q04683 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cxcr5Q04683 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cxcr5Q04683 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
Cxcr5Q04683 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC10.68□□□□□ -0.7
Cxcr5Q04683 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cxcr5Q04683 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cxcr5Q04683 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Cxcr5Q04683 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Cxcr5Q04683 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cxcr5Q04683 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cxcr5Q04683 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cxcr5Q04683 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cxcr5Q04683 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Cxcr5Q04683 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cxcr5Q04683 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC10.67□□□□□ -0.7
Cxcr5Q04683 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cxcr5Q04683 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Cxcr5Q04683 Gm12579-201ENSMUST00000118040 783 ntBASIC10.67□□□□□ -0.7
Cxcr5Q04683 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC10.67□□□□□ -0.7
Cxcr5Q04683 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
Cxcr5Q04683 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cxcr5Q04683 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC10.67□□□□□ -0.7
Cxcr5Q04683 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC10.67□□□□□ -0.7
Cxcr5Q04683 Ighv1-62-201ENSMUST00000193406 350 ntBASIC10.67□□□□□ -0.7
Cxcr5Q04683 Gm5302-201ENSMUST00000202130 796 ntBASIC10.67□□□□□ -0.7
Cxcr5Q04683 Gm8342-201ENSMUST00000209839 757 ntBASIC10.67□□□□□ -0.7
Cxcr5Q04683 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC10.67□□□□□ -0.7
Cxcr5Q04683 Gm5996-201ENSMUST00000211110 718 ntBASIC10.67□□□□□ -0.7
Cxcr5Q04683 AC107638.1-201ENSMUST00000213690 1061 ntBASIC10.67□□□□□ -0.7
Cxcr5Q04683 AC154319.1-201ENSMUST00000216330 312 ntBASIC10.67□□□□□ -0.7
Cxcr5Q04683 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC10.67□□□□□ -0.7
Cxcr5Q04683 AL589735.1-201ENSMUST00000224353 270 ntBASIC10.67□□□□□ -0.7
Cxcr5Q04683 AC134860.1-201ENSMUST00000224867 660 ntBASIC10.67□□□□□ -0.7
Cxcr5Q04683 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cxcr5Q04683 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cxcr5Q04683 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cxcr5Q04683 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Cxcr5Q04683 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cxcr5Q04683 Gm44153-201ENSMUST00000204162 1580 ntBASIC10.67□□□□□ -0.7
Cxcr5Q04683 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cxcr5Q04683 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cxcr5Q04683 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Cxcr5Q04683 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cxcr5Q04683 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Cxcr5Q04683 AC124732.3-201ENSMUST00000221835 1765 ntBASIC10.67□□□□□ -0.7
Cxcr5Q04683 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 75.1 ms