Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Gramd1b-214ENSMUST00000216821 7445 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
SgcaP82350 Bloc1s5-201ENSMUST00000035899 5634 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SgcaP82350 Osmr-201ENSMUST00000022746 5491 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
SgcaP82350 Clasp1-208ENSMUST00000187713 5367 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
SgcaP82350 Zfp804b-202ENSMUST00000200317 4430 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
SgcaP82350 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SgcaP82350 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
SgcaP82350 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
SgcaP82350 Anxa7-201ENSMUST00000065504 2851 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
SgcaP82350 Ncf2-201ENSMUST00000027754 2596 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SgcaP82350 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SgcaP82350 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SgcaP82350 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
SgcaP82350 Zcchc12-202ENSMUST00000115256 2197 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
SgcaP82350 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SgcaP82350 Gm37608-201ENSMUST00000195696 1880 ntBASIC9.43□□□□□ -0.9
SgcaP82350 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
SgcaP82350 Gm18798-201ENSMUST00000187264 1700 ntBASIC9.43□□□□□ -0.9
SgcaP82350 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC9.43□□□□□ -0.9
SgcaP82350 Zzef1-207ENSMUST00000172220 11249 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
SgcaP82350 Bmpr2-201ENSMUST00000087435 12899 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SgcaP82350 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SgcaP82350 Dcun1d4-203ENSMUST00000113558 4023 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SgcaP82350 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SgcaP82350 Gm10152-201ENSMUST00000193475 1344 ntBASIC9.43□□□□□ -0.9
SgcaP82350 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC9.43□□□□□ -0.9
SgcaP82350 Myo5a-206ENSMUST00000136731 6480 ntAPPRIS ALT1 TSL 5 BASIC9.43□□□□□ -0.9
SgcaP82350 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SgcaP82350 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC9.43□□□□□ -0.9
SgcaP82350 Gm6023-201ENSMUST00000118217 606 ntBASIC9.43□□□□□ -0.9
SgcaP82350 Gm15824-201ENSMUST00000119516 955 ntBASIC9.43□□□□□ -0.9
SgcaP82350 Gm11658-201ENSMUST00000120913 1008 ntBASIC9.43□□□□□ -0.9
SgcaP82350 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SgcaP82350 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC9.43□□□□□ -0.9
SgcaP82350 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SgcaP82350 Gm8835-201ENSMUST00000173096 1169 ntBASIC9.43□□□□□ -0.9
SgcaP82350 Gm2467-201ENSMUST00000182266 1010 ntBASIC9.43□□□□□ -0.9
SgcaP82350 Gm6981-201ENSMUST00000182467 1008 ntBASIC9.43□□□□□ -0.9
SgcaP82350 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC9.43□□□□□ -0.9
SgcaP82350 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SgcaP82350 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC9.43□□□□□ -0.9
SgcaP82350 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC9.43□□□□□ -0.9
SgcaP82350 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
SgcaP82350 Gm7293-201ENSMUST00000216682 1007 ntBASIC9.43□□□□□ -0.9
SgcaP82350 CT571245.2-201ENSMUST00000218421 305 ntBASIC9.43□□□□□ -0.9
SgcaP82350 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC9.43□□□□□ -0.9
SgcaP82350 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SgcaP82350 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SgcaP82350 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SgcaP82350 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SgcaP82350 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SgcaP82350 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SgcaP82350 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
SgcaP82350 Loxl4-201ENSMUST00000026190 3738 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
SgcaP82350 Abcg1-201ENSMUST00000024829 3610 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SgcaP82350 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SgcaP82350 AL645745.1-201ENSMUST00000222202 5348 ntTSL 2 BASIC9.43□□□□□ -0.9
SgcaP82350 Atxn1l-202ENSMUST00000212605 7439 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SgcaP82350 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
SgcaP82350 St5-203ENSMUST00000084738 3161 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
SgcaP82350 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SgcaP82350 Prdm16-205ENSMUST00000105637 8595 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
SgcaP82350 Prdm16-201ENSMUST00000030902 8598 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
SgcaP82350 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC9.43□□□□□ -0.9
SgcaP82350 Ehmt1-205ENSMUST00000114432 4539 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
SgcaP82350 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SgcaP82350 Ubr1-201ENSMUST00000028728 7768 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SgcaP82350 AC154171.3-201ENSMUST00000224519 2505 ntBASIC9.43□□□□□ -0.9
SgcaP82350 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
SgcaP82350 Gm43457-201ENSMUST00000200867 2409 ntBASIC9.43□□□□□ -0.9
SgcaP82350 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SgcaP82350 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SgcaP82350 Pcdh15-207ENSMUST00000124046 5336 ntTSL 5 BASIC9.43□□□□□ -0.9
SgcaP82350 Prdm10-204ENSMUST00000215499 6772 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
SgcaP82350 Hsdl1-204ENSMUST00000212517 2215 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SgcaP82350 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC9.43□□□□□ -0.9
SgcaP82350 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SgcaP82350 Ilf3-201ENSMUST00000067646 3549 ntAPPRIS P4 TSL 1 (best) BASIC9.43□□□□□ -0.9
SgcaP82350 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SgcaP82350 Pigk-204ENSMUST00000159899 4737 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SgcaP82350 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SgcaP82350 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
SgcaP82350 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC9.43□□□□□ -0.9
SgcaP82350 Fcamr-202ENSMUST00000112477 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
SgcaP82350 C1rl-201ENSMUST00000049124 3010 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SgcaP82350 AC173482.6-201ENSMUST00000225889 1741 ntBASIC9.42□□□□□ -0.9
SgcaP82350 9330175E14Rik-201ENSMUST00000180445 4852 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
SgcaP82350 Atp11c-201ENSMUST00000033480 5939 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
SgcaP82350 Cacna1c-209ENSMUST00000187386 6906 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
SgcaP82350 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SgcaP82350 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
SgcaP82350 Cnga4-201ENSMUST00000033187 2484 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SgcaP82350 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
SgcaP82350 AU022252-203ENSMUST00000141112 7151 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SgcaP82350 Qars-203ENSMUST00000134939 2374 ntTSL 5 BASIC9.42□□□□□ -0.9
SgcaP82350 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
SgcaP82350 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SgcaP82350 Rrp8-202ENSMUST00000098148 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
SgcaP82350 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
SgcaP82350 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms