Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cux2P70298 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cux2P70298 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cux2P70298 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
Cux2P70298 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cux2P70298 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Cux2P70298 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
Cux2P70298 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cux2P70298 Cdca8-202ENSMUST00000084296 1626 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cux2P70298 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cux2P70298 Gm37644-201ENSMUST00000192190 2270 ntBASIC18.1■□□□□ 0.49
Cux2P70298 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cux2P70298 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cux2P70298 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cux2P70298 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cux2P70298 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC18.09■□□□□ 0.49
Cux2P70298 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
Cux2P70298 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cux2P70298 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cux2P70298 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Cux2P70298 Fcgr2b-204ENSMUST00000159969 1578 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cux2P70298 Cd14-201ENSMUST00000061829 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cux2P70298 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cux2P70298 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cux2P70298 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC18.09■□□□□ 0.49
Cux2P70298 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC18.09■□□□□ 0.49
Cux2P70298 Gm5174-201ENSMUST00000171131 1423 ntBASIC18.09■□□□□ 0.49
Cux2P70298 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC18.09■□□□□ 0.49
Cux2P70298 Gm3404-201ENSMUST00000110596 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cux2P70298 4933428M09Rik-201ENSMUST00000113046 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cux2P70298 Gm13201-201ENSMUST00000144031 600 ntTSL 3 BASIC18.09■□□□□ 0.49
Cux2P70298 Gm28391-201ENSMUST00000185202 379 ntBASIC18.09■□□□□ 0.49
Cux2P70298 Gm29528-201ENSMUST00000186699 379 ntBASIC18.09■□□□□ 0.49
Cux2P70298 Gm29526-201ENSMUST00000187217 379 ntBASIC18.09■□□□□ 0.49
Cux2P70298 Gm19058-201ENSMUST00000192135 598 ntBASIC18.09■□□□□ 0.49
Cux2P70298 Gm44460-201ENSMUST00000196179 129 ntBASIC18.09■□□□□ 0.49
Cux2P70298 Gm19798-201ENSMUST00000201502 457 ntBASIC18.09■□□□□ 0.49
Cux2P70298 AC124772.3-201ENSMUST00000222535 575 ntBASIC18.09■□□□□ 0.49
Cux2P70298 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cux2P70298 Calm4-201ENSMUST00000042219 917 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Cux2P70298 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cux2P70298 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Cux2P70298 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cux2P70298 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Cux2P70298 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cux2P70298 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cux2P70298 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Cux2P70298 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cux2P70298 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cux2P70298 Zwilch-209ENSMUST00000176299 1831 ntTSL 5 BASIC18.08■□□□□ 0.49
Cux2P70298 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Cux2P70298 Gm7815-201ENSMUST00000196104 832 ntBASIC18.08■□□□□ 0.49
Cux2P70298 Gm7047-201ENSMUST00000196224 1063 ntBASIC18.08■□□□□ 0.49
Cux2P70298 Gm43002-201ENSMUST00000200310 155 ntBASIC18.08■□□□□ 0.49
Cux2P70298 Gm5191-201ENSMUST00000222882 1236 ntBASIC18.08■□□□□ 0.49
Cux2P70298 AC192333.3-201ENSMUST00000224041 463 ntBASIC18.08■□□□□ 0.49
Cux2P70298 Igsf5-201ENSMUST00000000163 1851 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Cux2P70298 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cux2P70298 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cux2P70298 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cux2P70298 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cux2P70298 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cux2P70298 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cux2P70298 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Cux2P70298 Gm4925-202ENSMUST00000168843 1561 ntBASIC18.08■□□□□ 0.48
Cux2P70298 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cux2P70298 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Cux2P70298 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Cux2P70298 AC154517.2-201ENSMUST00000220829 2458 ntBASIC18.08■□□□□ 0.48
Cux2P70298 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC18.08■□□□□ 0.48
Cux2P70298 A1cf-204ENSMUST00000224564 1432 ntBASIC18.08■□□□□ 0.48
Cux2P70298 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cux2P70298 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Cux2P70298 Gm45719-201ENSMUST00000207954 1662 ntBASIC18.08■□□□□ 0.48
Cux2P70298 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Cux2P70298 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cux2P70298 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cux2P70298 Gm16439-201ENSMUST00000100687 564 ntBASIC18.07■□□□□ 0.48
Cux2P70298 Slc31a2-202ENSMUST00000107467 868 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cux2P70298 Gm16013-201ENSMUST00000152249 353 ntTSL 3 BASIC18.07■□□□□ 0.48
Cux2P70298 D330041H03Rik-202ENSMUST00000180390 411 ntTSL 2 BASIC18.07■□□□□ 0.48
Cux2P70298 Gm38135-201ENSMUST00000195068 502 ntBASIC18.07■□□□□ 0.48
Cux2P70298 Gm37885-202ENSMUST00000195868 685 ntTSL 3 BASIC18.07■□□□□ 0.48
Cux2P70298 Gm39147-202ENSMUST00000211730 882 ntTSL 5 BASIC18.07■□□□□ 0.48
Cux2P70298 Gm34397-201ENSMUST00000213192 708 ntTSL 3 BASIC18.07■□□□□ 0.48
Cux2P70298 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cux2P70298 Gm14538-201ENSMUST00000122019 1327 ntBASIC18.07■□□□□ 0.48
Cux2P70298 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cux2P70298 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cux2P70298 Setmar-201ENSMUST00000049246 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cux2P70298 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cux2P70298 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Cux2P70298 Gm1661-201ENSMUST00000077500 1422 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cux2P70298 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cux2P70298 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cux2P70298 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cux2P70298 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cux2P70298 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC18.07■□□□□ 0.48
Cux2P70298 Gm15650-201ENSMUST00000135451 770 ntTSL 3 BASIC18.06■□□□□ 0.48
Cux2P70298 Gm15929-201ENSMUST00000138926 1161 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms