Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC10.64□□□□□ -0.71
Nup43P59235 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC10.64□□□□□ -0.71
Nup43P59235 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Nup43P59235 Gm24992-201ENSMUST00000157412 130 ntBASIC10.64□□□□□ -0.71
Nup43P59235 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nup43P59235 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Nup43P59235 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Nup43P59235 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC10.64□□□□□ -0.71
Nup43P59235 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nup43P59235 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC10.64□□□□□ -0.71
Nup43P59235 Gm9463-201ENSMUST00000206707 601 ntBASIC10.64□□□□□ -0.71
Nup43P59235 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC10.64□□□□□ -0.71
Nup43P59235 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Nup43P59235 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC10.64□□□□□ -0.71
Nup43P59235 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Nup43P59235 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nup43P59235 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Nup43P59235 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Nup43P59235 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nup43P59235 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nup43P59235 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nup43P59235 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nup43P59235 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nup43P59235 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nup43P59235 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nup43P59235 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC10.64□□□□□ -0.71
Nup43P59235 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nup43P59235 Gm2128-201ENSMUST00000108009 2560 ntBASIC10.64□□□□□ -0.71
Nup43P59235 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC10.64□□□□□ -0.71
Nup43P59235 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nup43P59235 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Nup43P59235 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC10.63□□□□□ -0.71
Nup43P59235 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Nup43P59235 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nup43P59235 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Nup43P59235 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nup43P59235 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nup43P59235 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Nup43P59235 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Nup43P59235 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nup43P59235 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nup43P59235 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nup43P59235 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Nup43P59235 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nup43P59235 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nup43P59235 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Nup43P59235 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Nup43P59235 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC10.63□□□□□ -0.71
Nup43P59235 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC10.63□□□□□ -0.71
Nup43P59235 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nup43P59235 Mup-ps29-201ENSMUST00000122281 202 ntBASIC10.63□□□□□ -0.71
Nup43P59235 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Nup43P59235 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Nup43P59235 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC10.63□□□□□ -0.71
Nup43P59235 Gm5523-201ENSMUST00000180415 997 ntBASIC10.63□□□□□ -0.71
Nup43P59235 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nup43P59235 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC10.63□□□□□ -0.71
Nup43P59235 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC10.63□□□□□ -0.71
Nup43P59235 Gm5542-201ENSMUST00000195485 1089 ntBASIC10.63□□□□□ -0.71
Nup43P59235 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC10.63□□□□□ -0.71
Nup43P59235 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Nup43P59235 AU017674-201ENSMUST00000222864 720 ntTSL 3 BASIC10.63□□□□□ -0.71
Nup43P59235 AC165260.2-203ENSMUST00000224237 336 ntBASIC10.63□□□□□ -0.71
Nup43P59235 AC124433.1-201ENSMUST00000224483 1063 ntBASIC10.63□□□□□ -0.71
Nup43P59235 AC135469.1-201ENSMUST00000225984 772 ntBASIC10.63□□□□□ -0.71
Nup43P59235 AC124408.1-201ENSMUST00000228938 707 ntBASIC10.63□□□□□ -0.71
Nup43P59235 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nup43P59235 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Nup43P59235 Snora73b-201ENSMUST00000083419 205 ntBASIC10.63□□□□□ -0.71
Nup43P59235 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nup43P59235 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nup43P59235 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Nup43P59235 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nup43P59235 Gm13135-201ENSMUST00000117628 3121 ntBASIC10.63□□□□□ -0.71
Nup43P59235 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Nup43P59235 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Nup43P59235 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nup43P59235 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nup43P59235 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Nup43P59235 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Nup43P59235 AC155245.1-201ENSMUST00000222266 1804 ntBASIC10.63□□□□□ -0.71
Nup43P59235 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Nup43P59235 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nup43P59235 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nup43P59235 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Nup43P59235 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Nup43P59235 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Nup43P59235 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Nup43P59235 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC10.62□□□□□ -0.71
Nup43P59235 Gm4900-201ENSMUST00000222046 1628 ntBASIC10.62□□□□□ -0.71
Nup43P59235 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nup43P59235 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nup43P59235 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC10.62□□□□□ -0.71
Nup43P59235 Gm6655-201ENSMUST00000201932 1309 ntBASIC10.62□□□□□ -0.71
Nup43P59235 Gm45677-201ENSMUST00000209975 1341 ntBASIC10.62□□□□□ -0.71
Nup43P59235 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nup43P59235 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nup43P59235 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nup43P59235 Gm21939-201ENSMUST00000221137 2773 ntBASIC10.62□□□□□ -0.71
Nup43P59235 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms