Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Gm7627-201ENSMUST00000183205 999 ntBASIC14.22□□□□□ -0.13
Msh6P54276 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Msh6P54276 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Msh6P54276 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Msh6P54276 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Msh6P54276 Gm7192-201ENSMUST00000210793 1137 ntBASIC14.22□□□□□ -0.13
Msh6P54276 Gm35850-202ENSMUST00000211705 2120 ntBASIC14.22□□□□□ -0.13
Msh6P54276 AC160929.1-201ENSMUST00000221247 415 ntBASIC14.22□□□□□ -0.13
Msh6P54276 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Msh6P54276 Gm24089-201ENSMUST00000093696 109 ntBASIC14.22□□□□□ -0.13
Msh6P54276 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Msh6P54276 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Msh6P54276 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Msh6P54276 Gm37014-201ENSMUST00000194723 2253 ntBASIC14.21□□□□□ -0.13
Msh6P54276 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Msh6P54276 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Msh6P54276 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Msh6P54276 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Msh6P54276 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Msh6P54276 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Msh6P54276 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Msh6P54276 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Msh6P54276 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Msh6P54276 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC14.21□□□□□ -0.13
Msh6P54276 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Msh6P54276 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Msh6P54276 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Msh6P54276 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Msh6P54276 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Msh6P54276 Gm14052-201ENSMUST00000121434 1031 ntBASIC14.21□□□□□ -0.14
Msh6P54276 Gm4917-201ENSMUST00000121452 650 ntBASIC14.21□□□□□ -0.14
Msh6P54276 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC14.21□□□□□ -0.14
Msh6P54276 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Msh6P54276 Gm16547-201ENSMUST00000159474 293 ntBASIC14.21□□□□□ -0.14
Msh6P54276 7420461P10Rik-201ENSMUST00000169439 781 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Msh6P54276 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Msh6P54276 Gm7069-201ENSMUST00000182418 1008 ntBASIC14.21□□□□□ -0.14
Msh6P54276 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC14.21□□□□□ -0.14
Msh6P54276 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Msh6P54276 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC14.21□□□□□ -0.14
Msh6P54276 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC14.21□□□□□ -0.14
Msh6P54276 Gm7238-201ENSMUST00000206467 973 ntBASIC14.21□□□□□ -0.14
Msh6P54276 Eef1akmt1-201ENSMUST00000022518 880 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Msh6P54276 Olfr435-201ENSMUST00000058118 942 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Msh6P54276 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Msh6P54276 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Msh6P54276 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Msh6P54276 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Msh6P54276 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC14.21□□□□□ -0.14
Msh6P54276 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Msh6P54276 Gm11757-202ENSMUST00000107321 1324 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Msh6P54276 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Msh6P54276 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Msh6P54276 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Msh6P54276 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Msh6P54276 Gm8050-201ENSMUST00000171987 1595 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Msh6P54276 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Msh6P54276 AC167565.1-201ENSMUST00000226980 1833 ntBASIC14.2□□□□□ -0.14
Msh6P54276 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Msh6P54276 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Msh6P54276 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Msh6P54276 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Msh6P54276 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Msh6P54276 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Msh6P54276 Gm44913-201ENSMUST00000208060 2990 ntBASIC14.2□□□□□ -0.14
Msh6P54276 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
Msh6P54276 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Msh6P54276 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Msh6P54276 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Msh6P54276 Gm23255-201ENSMUST00000102244 110 ntBASIC14.2□□□□□ -0.14
Msh6P54276 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Msh6P54276 Gm12463-201ENSMUST00000118271 849 ntBASIC14.2□□□□□ -0.14
Msh6P54276 Gm1826-201ENSMUST00000118646 1162 ntBASIC14.2□□□□□ -0.14
Msh6P54276 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Msh6P54276 Gm12052-201ENSMUST00000142151 933 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Msh6P54276 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Msh6P54276 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Msh6P54276 Gm8384-201ENSMUST00000190905 704 ntBASIC14.2□□□□□ -0.14
Msh6P54276 Gm42511-201ENSMUST00000196160 234 ntBASIC14.2□□□□□ -0.14
Msh6P54276 Gm43275-201ENSMUST00000202053 1020 ntBASIC14.2□□□□□ -0.14
Msh6P54276 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC14.2□□□□□ -0.14
Msh6P54276 Tpi-rs4-201ENSMUST00000213734 720 ntBASIC14.2□□□□□ -0.14
Msh6P54276 BC049987-201ENSMUST00000213859 918 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Msh6P54276 Gm7183-201ENSMUST00000213870 1005 ntBASIC14.2□□□□□ -0.14
Msh6P54276 AC137871.1-201ENSMUST00000228278 475 ntBASIC14.2□□□□□ -0.14
Msh6P54276 Krtap2-4-201ENSMUST00000074926 828 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Msh6P54276 Gm6564-201ENSMUST00000075377 619 ntBASIC14.2□□□□□ -0.14
Msh6P54276 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Msh6P54276 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Msh6P54276 Gm42815-201ENSMUST00000198787 1470 ntBASIC14.2□□□□□ -0.14
Msh6P54276 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Msh6P54276 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Msh6P54276 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Msh6P54276 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Msh6P54276 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Msh6P54276 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Msh6P54276 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Msh6P54276 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Msh6P54276 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Msh6P54276 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms