Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC11.44□□□□□ -0.58
Vps4bP46467 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Vps4bP46467 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Vps4bP46467 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Vps4bP46467 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
Vps4bP46467 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Vps4bP46467 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Vps4bP46467 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Vps4bP46467 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Vps4bP46467 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Vps4bP46467 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Vps4bP46467 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Vps4bP46467 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Vps4bP46467 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Vps4bP46467 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Vps4bP46467 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Vps4bP46467 Nudt13-207ENSMUST00000224311 1574 ntBASIC11.43□□□□□ -0.58
Vps4bP46467 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
Vps4bP46467 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Vps4bP46467 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Vps4bP46467 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Vps4bP46467 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Vps4bP46467 Gm9062-201ENSMUST00000117712 727 ntBASIC11.43□□□□□ -0.58
Vps4bP46467 Gm12579-201ENSMUST00000118040 783 ntBASIC11.43□□□□□ -0.58
Vps4bP46467 Gm15131-201ENSMUST00000119124 595 ntBASIC11.43□□□□□ -0.58
Vps4bP46467 Gm8199-201ENSMUST00000121323 823 ntBASIC11.43□□□□□ -0.58
Vps4bP46467 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Vps4bP46467 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Vps4bP46467 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
Vps4bP46467 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC11.43□□□□□ -0.58
Vps4bP46467 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Vps4bP46467 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Vps4bP46467 Gm3150-201ENSMUST00000166418 204 ntBASIC11.43□□□□□ -0.58
Vps4bP46467 Olfml3-204ENSMUST00000169286 874 ntBASIC11.43□□□□□ -0.58
Vps4bP46467 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Vps4bP46467 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC11.43□□□□□ -0.58
Vps4bP46467 Gm17040-202ENSMUST00000170597 889 ntBASIC11.43□□□□□ -0.58
Vps4bP46467 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Vps4bP46467 Uba52-ps-201ENSMUST00000183770 379 ntBASIC11.43□□□□□ -0.58
Vps4bP46467 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Vps4bP46467 Gm44415-201ENSMUST00000204151 2112 ntBASIC11.43□□□□□ -0.58
Vps4bP46467 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Vps4bP46467 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC11.43□□□□□ -0.58
Vps4bP46467 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC11.43□□□□□ -0.58
Vps4bP46467 Spcs1-203ENSMUST00000226374 592 ntBASIC11.43□□□□□ -0.58
Vps4bP46467 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Vps4bP46467 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Vps4bP46467 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Vps4bP46467 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Vps4bP46467 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Vps4bP46467 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Vps4bP46467 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Vps4bP46467 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Vps4bP46467 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Vps4bP46467 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Vps4bP46467 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Vps4bP46467 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Vps4bP46467 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Vps4bP46467 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Vps4bP46467 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Vps4bP46467 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Vps4bP46467 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Vps4bP46467 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Vps4bP46467 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Vps4bP46467 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC11.42□□□□□ -0.58
Vps4bP46467 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Vps4bP46467 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Vps4bP46467 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Vps4bP46467 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Vps4bP46467 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Vps4bP46467 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Vps4bP46467 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Vps4bP46467 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Vps4bP46467 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Vps4bP46467 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Vps4bP46467 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Vps4bP46467 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Vps4bP46467 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Vps4bP46467 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC11.42□□□□□ -0.58
Vps4bP46467 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC11.42□□□□□ -0.58
Vps4bP46467 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Vps4bP46467 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC11.42□□□□□ -0.58
Vps4bP46467 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Vps4bP46467 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Vps4bP46467 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Vps4bP46467 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC11.42□□□□□ -0.58
Vps4bP46467 Gm8876-201ENSMUST00000120768 1122 ntBASIC11.42□□□□□ -0.58
Vps4bP46467 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Vps4bP46467 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Vps4bP46467 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Vps4bP46467 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Vps4bP46467 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC11.42□□□□□ -0.58
Vps4bP46467 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC11.42□□□□□ -0.58
Vps4bP46467 Gm43058-201ENSMUST00000197645 625 ntBASIC11.42□□□□□ -0.58
Vps4bP46467 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Vps4bP46467 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Vps4bP46467 Gm44545-201ENSMUST00000208262 746 ntBASIC11.42□□□□□ -0.58
Vps4bP46467 AC122876.1-201ENSMUST00000217619 825 ntBASIC11.42□□□□□ -0.58
Vps4bP46467 AC156501.1-201ENSMUST00000228219 270 ntBASIC11.42□□□□□ -0.58
Vps4bP46467 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms