Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
HttP42859 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
HttP42859 Lrrc4-201ENSMUST00000062304 3615 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
HttP42859 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
HttP42859 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
HttP42859 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
HttP42859 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
HttP42859 Gm10754-202ENSMUST00000220233 1633 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
HttP42859 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
HttP42859 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
HttP42859 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
HttP42859 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
HttP42859 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC11.55□□□□□ -0.56
HttP42859 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
HttP42859 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
HttP42859 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
HttP42859 Gm15369-201ENSMUST00000119681 394 ntBASIC11.55□□□□□ -0.56
HttP42859 Gm11465-201ENSMUST00000127942 435 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
HttP42859 Gm25426-201ENSMUST00000157606 170 ntBASIC11.55□□□□□ -0.56
HttP42859 Gm5083-202ENSMUST00000163056 1204 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
HttP42859 Gm37261-201ENSMUST00000194360 1101 ntBASIC11.55□□□□□ -0.56
HttP42859 Wars2-205ENSMUST00000198044 403 ntTSL 3 BASIC11.55□□□□□ -0.56
HttP42859 Gm42588-201ENSMUST00000200538 1297 ntBASIC11.55□□□□□ -0.56
HttP42859 Gm40578-202ENSMUST00000221429 920 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
HttP42859 AC124555.1-201ENSMUST00000227051 880 ntBASIC11.55□□□□□ -0.56
HttP42859 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
HttP42859 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
HttP42859 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
HttP42859 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.55□□□□□ -0.56
HttP42859 Als2cr12-206ENSMUST00000191565 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
HttP42859 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
HttP42859 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
HttP42859 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
HttP42859 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.55□□□□□ -0.56
HttP42859 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
HttP42859 S100a16-205ENSMUST00000107334 879 ntAPPRIS P1 TSL 3 BASIC11.55□□□□□ -0.56
HttP42859 Gm8482-201ENSMUST00000117972 471 ntBASIC11.55□□□□□ -0.56
HttP42859 Gm13841-201ENSMUST00000118829 483 ntBASIC11.55□□□□□ -0.56
HttP42859 Gm11449-201ENSMUST00000119175 476 ntBASIC11.55□□□□□ -0.56
HttP42859 Gm8210-201ENSMUST00000178557 483 ntBASIC11.55□□□□□ -0.56
HttP42859 Gm15454-201ENSMUST00000179718 483 ntBASIC11.55□□□□□ -0.56
HttP42859 Ighv5-10-201ENSMUST00000194591 252 ntBASIC11.55□□□□□ -0.56
HttP42859 6430531B16Rik-205ENSMUST00000210254 952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
HttP42859 AC159899.1-201ENSMUST00000214024 733 ntBASIC11.55□□□□□ -0.56
HttP42859 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
HttP42859 Gm6344-201ENSMUST00000075962 483 ntBASIC11.55□□□□□ -0.56
HttP42859 Dpep2-202ENSMUST00000117555 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
HttP42859 Pnlip-201ENSMUST00000057270 1485 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
HttP42859 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
HttP42859 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
HttP42859 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
HttP42859 Car13-201ENSMUST00000029071 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
HttP42859 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
HttP42859 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
HttP42859 Gm1661-201ENSMUST00000077500 1422 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
HttP42859 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
HttP42859 Zeb2os-201ENSMUST00000127150 1305 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
HttP42859 Olfr281-201ENSMUST00000109163 1058 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
HttP42859 Oosp2-201ENSMUST00000121793 677 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
HttP42859 Ighv1-33-201ENSMUST00000193220 350 ntBASIC11.55□□□□□ -0.56
HttP42859 AC123533.3-201ENSMUST00000228056 454 ntBASIC11.55□□□□□ -0.56
HttP42859 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
HttP42859 Mx1-202ENSMUST00000113768 2695 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
HttP42859 Gm31182-201ENSMUST00000219061 2391 ntTSL 5 BASIC11.55□□□□□ -0.56
HttP42859 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
HttP42859 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
HttP42859 Gm45719-201ENSMUST00000207954 1662 ntBASIC11.54□□□□□ -0.56
HttP42859 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
HttP42859 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
HttP42859 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
HttP42859 Olfr543-202ENSMUST00000219647 1456 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
HttP42859 Tmigd1-202ENSMUST00000102495 1427 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
HttP42859 Gm13120-201ENSMUST00000117343 1446 ntBASIC11.54□□□□□ -0.56
HttP42859 Gm13104-201ENSMUST00000119651 1446 ntBASIC11.54□□□□□ -0.56
HttP42859 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
HttP42859 Ucma-202ENSMUST00000115010 847 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
HttP42859 A730090N16Rik-201ENSMUST00000160137 627 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
HttP42859 Gm44936-201ENSMUST00000207324 735 ntBASIC11.54□□□□□ -0.56
HttP42859 Gm32710-201ENSMUST00000210677 618 ntTSL 5 BASIC11.54□□□□□ -0.56
HttP42859 Gm30619-201ENSMUST00000213962 686 ntBASIC11.54□□□□□ -0.56
HttP42859 AC116390.1-201ENSMUST00000227975 670 ntBASIC11.54□□□□□ -0.56
HttP42859 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
HttP42859 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
HttP42859 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
HttP42859 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
HttP42859 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
HttP42859 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
HttP42859 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
HttP42859 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
HttP42859 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.54□□□□□ -0.56
HttP42859 Gm42974-201ENSMUST00000199556 2654 ntBASIC11.54□□□□□ -0.56
HttP42859 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
HttP42859 Gm7190-201ENSMUST00000118669 1452 ntBASIC11.54□□□□□ -0.56
HttP42859 Gm12904-201ENSMUST00000117451 1399 ntBASIC11.54□□□□□ -0.56
HttP42859 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
HttP42859 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
HttP42859 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
HttP42859 Bcas1os2-201ENSMUST00000131931 1174 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
HttP42859 Gm43066-201ENSMUST00000199589 1260 ntBASIC11.54□□□□□ -0.56
HttP42859 Acsm5-204ENSMUST00000207387 1130 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 98.2 ms