Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Tnfrsf1bP25119 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Tnfrsf1bP25119 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Tnfrsf1bP25119 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Tnfrsf1bP25119 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Tnfrsf1bP25119 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Tnfrsf1bP25119 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Tnfrsf1bP25119 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Tnfrsf1bP25119 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Tnfrsf1bP25119 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC10.47□□□□□ -0.73
Tnfrsf1bP25119 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Tnfrsf1bP25119 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC10.47□□□□□ -0.73
Tnfrsf1bP25119 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Tnfrsf1bP25119 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Tnfrsf1bP25119 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Tnfrsf1bP25119 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Tnfrsf1bP25119 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Tnfrsf1bP25119 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Tnfrsf1bP25119 AC122291.1-201ENSMUST00000228937 5748 ntBASIC10.46□□□□□ -0.73
Tnfrsf1bP25119 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Tnfrsf1bP25119 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.73
Tnfrsf1bP25119 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC10.46□□□□□ -0.73
Tnfrsf1bP25119 Gm13422-201ENSMUST00000118834 504 ntBASIC10.46□□□□□ -0.73
Tnfrsf1bP25119 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Tnfrsf1bP25119 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Tnfrsf1bP25119 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Tnfrsf1bP25119 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Tnfrsf1bP25119 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Tnfrsf1bP25119 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Tnfrsf1bP25119 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Tnfrsf1bP25119 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC10.46□□□□□ -0.73
Tnfrsf1bP25119 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC10.46□□□□□ -0.73
Tnfrsf1bP25119 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Tnfrsf1bP25119 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Tnfrsf1bP25119 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Tnfrsf1bP25119 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Tnfrsf1bP25119 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Tnfrsf1bP25119 Gm44999-201ENSMUST00000207456 1493 ntBASIC10.46□□□□□ -0.74
Tnfrsf1bP25119 Adgrv1-214ENSMUST00000224088 1492 ntBASIC10.46□□□□□ -0.74
Tnfrsf1bP25119 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC10.46□□□□□ -0.74
Tnfrsf1bP25119 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Tnfrsf1bP25119 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Tnfrsf1bP25119 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC10.46□□□□□ -0.74
Tnfrsf1bP25119 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Tnfrsf1bP25119 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Tnfrsf1bP25119 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Tnfrsf1bP25119 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Tnfrsf1bP25119 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Tnfrsf1bP25119 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC10.46□□□□□ -0.74
Tnfrsf1bP25119 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC10.46□□□□□ -0.74
Tnfrsf1bP25119 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Tnfrsf1bP25119 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Tnfrsf1bP25119 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Tnfrsf1bP25119 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Tnfrsf1bP25119 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Tnfrsf1bP25119 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Tnfrsf1bP25119 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Tnfrsf1bP25119 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Tnfrsf1bP25119 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Tnfrsf1bP25119 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Tnfrsf1bP25119 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Tnfrsf1bP25119 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Tnfrsf1bP25119 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Tnfrsf1bP25119 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Tnfrsf1bP25119 Mbnl2-204ENSMUST00000227012 2390 ntBASIC10.45□□□□□ -0.74
Tnfrsf1bP25119 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC10.45□□□□□ -0.74
Tnfrsf1bP25119 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC10.45□□□□□ -0.74
Tnfrsf1bP25119 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Tnfrsf1bP25119 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Tnfrsf1bP25119 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC10.45□□□□□ -0.74
Tnfrsf1bP25119 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Tnfrsf1bP25119 Gm9915-201ENSMUST00000066196 1383 ntBASIC10.45□□□□□ -0.74
Tnfrsf1bP25119 Gm9415-201ENSMUST00000200462 1321 ntBASIC10.45□□□□□ -0.74
Tnfrsf1bP25119 Gm14395-201ENSMUST00000120494 563 ntBASIC10.45□□□□□ -0.74
Tnfrsf1bP25119 Gm14460-201ENSMUST00000121511 639 ntBASIC10.45□□□□□ -0.74
Tnfrsf1bP25119 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC10.45□□□□□ -0.74
Tnfrsf1bP25119 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC10.45□□□□□ -0.74
Tnfrsf1bP25119 Gm21778-201ENSMUST00000178779 471 ntBASIC10.45□□□□□ -0.74
Tnfrsf1bP25119 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Tnfrsf1bP25119 Gm5542-201ENSMUST00000195485 1089 ntBASIC10.45□□□□□ -0.74
Tnfrsf1bP25119 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Tnfrsf1bP25119 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC10.45□□□□□ -0.74
Tnfrsf1bP25119 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC10.45□□□□□ -0.74
Tnfrsf1bP25119 AC132881.2-201ENSMUST00000225474 709 ntBASIC10.45□□□□□ -0.74
Tnfrsf1bP25119 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Tnfrsf1bP25119 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Tnfrsf1bP25119 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Tnfrsf1bP25119 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Tnfrsf1bP25119 Snora73b-201ENSMUST00000083419 205 ntBASIC10.45□□□□□ -0.74
Tnfrsf1bP25119 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Tnfrsf1bP25119 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Tnfrsf1bP25119 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Tnfrsf1bP25119 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Tnfrsf1bP25119 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Tnfrsf1bP25119 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC10.45□□□□□ -0.74
Tnfrsf1bP25119 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Tnfrsf1bP25119 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC10.45□□□□□ -0.74
Tnfrsf1bP25119 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC10.45□□□□□ -0.74
Tnfrsf1bP25119 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Tnfrsf1bP25119 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms