Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Gm9619-201ENSMUST00000211587 762 ntBASIC17.03■□□□□ 0.32
Polr1aO35134 Rps2-ps12-201ENSMUST00000214262 785 ntBASIC17.03■□□□□ 0.32
Polr1aO35134 AC134537.1-201ENSMUST00000219205 265 ntBASIC17.03■□□□□ 0.32
Polr1aO35134 AC134913.2-201ENSMUST00000225017 771 ntBASIC17.03■□□□□ 0.32
Polr1aO35134 Olfr1417-201ENSMUST00000061235 948 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Polr1aO35134 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Polr1aO35134 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Polr1aO35134 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Polr1aO35134 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Polr1aO35134 AC137950.2-202ENSMUST00000227150 1635 ntBASIC17.03■□□□□ 0.32
Polr1aO35134 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Polr1aO35134 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Polr1aO35134 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Polr1aO35134 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Polr1aO35134 Slfn3-201ENSMUST00000019130 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Polr1aO35134 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Polr1aO35134 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Polr1aO35134 Gm45124-201ENSMUST00000206723 2755 ntBASIC17.02■□□□□ 0.32
Polr1aO35134 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Polr1aO35134 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Polr1aO35134 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Polr1aO35134 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Polr1aO35134 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Polr1aO35134 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Polr1aO35134 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC17.02■□□□□ 0.32
Polr1aO35134 Gm11473-201ENSMUST00000118980 359 ntBASIC17.02■□□□□ 0.32
Polr1aO35134 Rab11a-204ENSMUST00000167569 726 ntTSL 3 BASIC17.02■□□□□ 0.32
Polr1aO35134 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC17.02■□□□□ 0.32
Polr1aO35134 Erg-209ENSMUST00000177450 1280 ntTSL 5 BASIC17.02■□□□□ 0.32
Polr1aO35134 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
Polr1aO35134 Gm8525-201ENSMUST00000189674 861 ntBASIC17.02■□□□□ 0.32
Polr1aO35134 Gm44388-201ENSMUST00000204350 258 ntBASIC17.02■□□□□ 0.32
Polr1aO35134 Gm36862-204ENSMUST00000223365 642 ntTSL 3 BASIC17.02■□□□□ 0.32
Polr1aO35134 AC154436.1-201ENSMUST00000227272 782 ntBASIC17.02■□□□□ 0.32
Polr1aO35134 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Polr1aO35134 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Polr1aO35134 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC17.02■□□□□ 0.32
Polr1aO35134 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Polr1aO35134 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Polr1aO35134 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Polr1aO35134 Epha6-203ENSMUST00000161358 1356 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Polr1aO35134 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Polr1aO35134 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Polr1aO35134 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC17.02■□□□□ 0.31
Polr1aO35134 Tmigd1-202ENSMUST00000102495 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Polr1aO35134 Cdca8-202ENSMUST00000084296 1626 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Polr1aO35134 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Polr1aO35134 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Polr1aO35134 Gm11544-201ENSMUST00000120215 382 ntBASIC17.01■□□□□ 0.31
Polr1aO35134 Rpl10a-ps1-201ENSMUST00000120360 654 ntBASIC17.01■□□□□ 0.31
Polr1aO35134 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Polr1aO35134 Psmb6-ps2-201ENSMUST00000187074 705 ntBASIC17.01■□□□□ 0.31
Polr1aO35134 Gm5311-201ENSMUST00000203518 709 ntBASIC17.01■□□□□ 0.31
Polr1aO35134 Gm45310-201ENSMUST00000210436 275 ntBASIC17.01■□□□□ 0.31
Polr1aO35134 Ccdc114-205ENSMUST00000211367 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Polr1aO35134 Gm4032-203ENSMUST00000211600 531 ntTSL 3 BASIC17.01■□□□□ 0.31
Polr1aO35134 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Polr1aO35134 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Polr1aO35134 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Polr1aO35134 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Polr1aO35134 Myc-204ENSMUST00000160009 1765 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Polr1aO35134 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Polr1aO35134 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Polr1aO35134 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Polr1aO35134 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC17.01■□□□□ 0.31
Polr1aO35134 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Polr1aO35134 Gm13120-201ENSMUST00000117343 1446 ntBASIC17.01■□□□□ 0.31
Polr1aO35134 Gm13104-201ENSMUST00000119651 1446 ntBASIC17.01■□□□□ 0.31
Polr1aO35134 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Polr1aO35134 Psme2-201ENSMUST00000111378 795 ntTSL 5 BASIC17.01■□□□□ 0.31
Polr1aO35134 Olfr874-201ENSMUST00000115004 933 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Polr1aO35134 Gm11235-201ENSMUST00000117763 333 ntBASIC17.01■□□□□ 0.31
Polr1aO35134 Gm14176-201ENSMUST00000121302 477 ntBASIC17.01■□□□□ 0.31
Polr1aO35134 Bola3-203ENSMUST00000122216 554 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Polr1aO35134 Gm13954-201ENSMUST00000123441 543 ntTSL 3 BASIC17.01■□□□□ 0.31
Polr1aO35134 3110039M20Rik-201ENSMUST00000127041 868 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Polr1aO35134 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Polr1aO35134 Gm25394-201ENSMUST00000157338 133 ntBASIC17.01■□□□□ 0.31
Polr1aO35134 Gm4705-201ENSMUST00000177415 354 ntBASIC17.01■□□□□ 0.31
Polr1aO35134 Gm5801-201ENSMUST00000182247 780 ntBASIC17.01■□□□□ 0.31
Polr1aO35134 Rarres2-203ENSMUST00000204182 672 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Polr1aO35134 Madcam1-202ENSMUST00000217748 944 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Polr1aO35134 Olfr1335-202ENSMUST00000219094 1148 ntAPPRIS P2 BASIC17.01■□□□□ 0.31
Polr1aO35134 AC125409.3-201ENSMUST00000223488 653 ntBASIC17.01■□□□□ 0.31
Polr1aO35134 Olfr1335-201ENSMUST00000084313 1148 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
Polr1aO35134 Myadm-202ENSMUST00000164553 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Polr1aO35134 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Polr1aO35134 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Polr1aO35134 Trim34b-202ENSMUST00000180136 1535 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Polr1aO35134 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Polr1aO35134 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Polr1aO35134 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC17■□□□□ 0.31
Polr1aO35134 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Polr1aO35134 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Polr1aO35134 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Polr1aO35134 Gm45719-201ENSMUST00000207954 1662 ntBASIC17■□□□□ 0.31
Polr1aO35134 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Polr1aO35134 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC17■□□□□ 0.31
Polr1aO35134 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC17■□□□□ 0.31
Polr1aO35134 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 101.9 ms