Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
NpcdF8VQB8 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NpcdF8VQB8 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
NpcdF8VQB8 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NpcdF8VQB8 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NpcdF8VQB8 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NpcdF8VQB8 Gm43075-201ENSMUST00000198613 3905 ntBASIC13.6□□□□□ -0.23
NpcdF8VQB8 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NpcdF8VQB8 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
NpcdF8VQB8 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
NpcdF8VQB8 Gm26119-201ENSMUST00000175601 104 ntBASIC13.6□□□□□ -0.23
NpcdF8VQB8 Gm27440-201ENSMUST00000184785 107 ntBASIC13.6□□□□□ -0.23
NpcdF8VQB8 Gm19087-201ENSMUST00000191430 946 ntBASIC13.6□□□□□ -0.23
NpcdF8VQB8 Gm2238-201ENSMUST00000192074 3669 ntBASIC13.6□□□□□ -0.23
NpcdF8VQB8 Gm45040-201ENSMUST00000207742 578 ntTSL 3 BASIC13.6□□□□□ -0.23
NpcdF8VQB8 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC13.6□□□□□ -0.23
NpcdF8VQB8 Gm32872-201ENSMUST00000220037 205 ntTSL 3 BASIC13.6□□□□□ -0.23
NpcdF8VQB8 AC122035.1-201ENSMUST00000227576 1016 ntBASIC13.6□□□□□ -0.23
NpcdF8VQB8 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NpcdF8VQB8 Olfr985-201ENSMUST00000060345 1116 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
NpcdF8VQB8 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NpcdF8VQB8 Ccdc30-203ENSMUST00000084307 989 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NpcdF8VQB8 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NpcdF8VQB8 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
NpcdF8VQB8 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
NpcdF8VQB8 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
NpcdF8VQB8 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
NpcdF8VQB8 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NpcdF8VQB8 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
NpcdF8VQB8 Eef1akmt4-202ENSMUST00000119224 1464 ntTSL 2 BASIC13.6□□□□□ -0.23
NpcdF8VQB8 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NpcdF8VQB8 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
NpcdF8VQB8 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NpcdF8VQB8 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NpcdF8VQB8 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
NpcdF8VQB8 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NpcdF8VQB8 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NpcdF8VQB8 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NpcdF8VQB8 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
NpcdF8VQB8 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NpcdF8VQB8 Gm13347-201ENSMUST00000120298 1353 ntBASIC13.59□□□□□ -0.23
NpcdF8VQB8 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
NpcdF8VQB8 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NpcdF8VQB8 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NpcdF8VQB8 Gm14132-201ENSMUST00000117188 1719 ntBASIC13.59□□□□□ -0.23
NpcdF8VQB8 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NpcdF8VQB8 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
NpcdF8VQB8 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
NpcdF8VQB8 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NpcdF8VQB8 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
NpcdF8VQB8 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NpcdF8VQB8 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
NpcdF8VQB8 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
NpcdF8VQB8 Itpa-ps1-201ENSMUST00000117207 597 ntBASIC13.59□□□□□ -0.23
NpcdF8VQB8 Sfi1-204ENSMUST00000118627 831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
NpcdF8VQB8 Gm12736-201ENSMUST00000119330 236 ntBASIC13.59□□□□□ -0.23
NpcdF8VQB8 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC13.59□□□□□ -0.23
NpcdF8VQB8 Gm15498-201ENSMUST00000126693 723 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NpcdF8VQB8 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC13.59□□□□□ -0.23
NpcdF8VQB8 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NpcdF8VQB8 Cd9-ps-201ENSMUST00000174687 650 ntBASIC13.59□□□□□ -0.23
NpcdF8VQB8 Gm18558-201ENSMUST00000186253 1214 ntBASIC13.59□□□□□ -0.23
NpcdF8VQB8 Gm28196-201ENSMUST00000187719 640 ntBASIC13.59□□□□□ -0.23
NpcdF8VQB8 Zcwpw2-203ENSMUST00000187803 372 ntBASIC13.59□□□□□ -0.23
NpcdF8VQB8 1700088E04Rik-207ENSMUST00000188562 631 ntTSL 3 BASIC13.59□□□□□ -0.23
NpcdF8VQB8 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NpcdF8VQB8 Ighv1-70-201ENSMUST00000196509 351 ntBASIC13.59□□□□□ -0.23
NpcdF8VQB8 Zfp655-204ENSMUST00000199003 601 ntTSL 2 BASIC13.59□□□□□ -0.23
NpcdF8VQB8 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC13.59□□□□□ -0.23
NpcdF8VQB8 AC134601.2-201ENSMUST00000221071 130 ntBASIC13.59□□□□□ -0.23
NpcdF8VQB8 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NpcdF8VQB8 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
NpcdF8VQB8 AC156031.2-201ENSMUST00000213107 3310 ntBASIC13.59□□□□□ -0.23
NpcdF8VQB8 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NpcdF8VQB8 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NpcdF8VQB8 Gm44806-201ENSMUST00000205574 2303 ntBASIC13.59□□□□□ -0.23
NpcdF8VQB8 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
NpcdF8VQB8 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NpcdF8VQB8 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NpcdF8VQB8 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NpcdF8VQB8 Eloc-208ENSMUST00000188641 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NpcdF8VQB8 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NpcdF8VQB8 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
NpcdF8VQB8 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
NpcdF8VQB8 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NpcdF8VQB8 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
NpcdF8VQB8 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
NpcdF8VQB8 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NpcdF8VQB8 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NpcdF8VQB8 Gm1995-201ENSMUST00000220838 2602 ntBASIC13.59□□□□□ -0.23
NpcdF8VQB8 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NpcdF8VQB8 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.23
NpcdF8VQB8 H2-M10.1-201ENSMUST00000025322 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
NpcdF8VQB8 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
NpcdF8VQB8 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
NpcdF8VQB8 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
NpcdF8VQB8 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
NpcdF8VQB8 AC166361.2-201ENSMUST00000219269 1415 ntBASIC13.58□□□□□ -0.24
NpcdF8VQB8 Gm43167-201ENSMUST00000202001 1606 ntBASIC13.58□□□□□ -0.24
NpcdF8VQB8 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms