Protein–RNA interactions for Protein: F6SEU4

Syngap1, Ras/Rap GTPase-activating protein SynGAP, mousemouse

Predictions only

Length 1,340 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syngap1F6SEU4 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Syngap1F6SEU4 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Syngap1F6SEU4 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Syngap1F6SEU4 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Syngap1F6SEU4 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Syngap1F6SEU4 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.72□□□□□ -0.37
Syngap1F6SEU4 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Syngap1F6SEU4 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Syngap1F6SEU4 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Syngap1F6SEU4 Gm4900-201ENSMUST00000222046 1628 ntBASIC12.72□□□□□ -0.37
Syngap1F6SEU4 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.72□□□□□ -0.37
Syngap1F6SEU4 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Syngap1F6SEU4 Ighv1-62-3-201ENSMUST00000103532 405 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Syngap1F6SEU4 Ighv1-74-201ENSMUST00000103543 348 ntAPPRIS ALT2 BASIC12.72□□□□□ -0.37
Syngap1F6SEU4 Gm23612-201ENSMUST00000103823 110 ntBASIC12.72□□□□□ -0.37
Syngap1F6SEU4 Gm15746-201ENSMUST00000120684 1027 ntBASIC12.72□□□□□ -0.37
Syngap1F6SEU4 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Syngap1F6SEU4 Gm24294-201ENSMUST00000158295 277 ntBASIC12.72□□□□□ -0.37
Syngap1F6SEU4 2410124H12Rik-201ENSMUST00000160494 706 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Syngap1F6SEU4 Gm20703-201ENSMUST00000175668 385 ntTSL 2 BASIC12.72□□□□□ -0.37
Syngap1F6SEU4 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12.72□□□□□ -0.37
Syngap1F6SEU4 Gm23576-201ENSMUST00000179918 110 ntBASIC12.72□□□□□ -0.37
Syngap1F6SEU4 Gm7741-201ENSMUST00000181445 989 ntBASIC12.72□□□□□ -0.37
Syngap1F6SEU4 2310009A05Rik-201ENSMUST00000184126 496 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Syngap1F6SEU4 Gm17944-201ENSMUST00000186351 643 ntBASIC12.72□□□□□ -0.37
Syngap1F6SEU4 Gm37638-201ENSMUST00000194337 1123 ntBASIC12.72□□□□□ -0.37
Syngap1F6SEU4 Gm34379-201ENSMUST00000195036 290 ntBASIC12.72□□□□□ -0.37
Syngap1F6SEU4 Gm43671-201ENSMUST00000200422 433 ntBASIC12.72□□□□□ -0.37
Syngap1F6SEU4 Gm7504-201ENSMUST00000201449 424 ntBASIC12.72□□□□□ -0.37
Syngap1F6SEU4 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC12.72□□□□□ -0.37
Syngap1F6SEU4 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Syngap1F6SEU4 Gm18561-201ENSMUST00000206027 804 ntBASIC12.72□□□□□ -0.37
Syngap1F6SEU4 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Syngap1F6SEU4 AC162932.1-201ENSMUST00000219209 872 ntBASIC12.72□□□□□ -0.37
Syngap1F6SEU4 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Syngap1F6SEU4 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Syngap1F6SEU4 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Syngap1F6SEU4 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Syngap1F6SEU4 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Syngap1F6SEU4 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Syngap1F6SEU4 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Syngap1F6SEU4 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Syngap1F6SEU4 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Syngap1F6SEU4 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Syngap1F6SEU4 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Syngap1F6SEU4 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Syngap1F6SEU4 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Syngap1F6SEU4 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Syngap1F6SEU4 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Syngap1F6SEU4 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Syngap1F6SEU4 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Syngap1F6SEU4 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Syngap1F6SEU4 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC12.71□□□□□ -0.37
Syngap1F6SEU4 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.71□□□□□ -0.37
Syngap1F6SEU4 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Syngap1F6SEU4 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Syngap1F6SEU4 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Syngap1F6SEU4 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Syngap1F6SEU4 S100a3-201ENSMUST00000001047 712 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Syngap1F6SEU4 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Syngap1F6SEU4 Nup188-202ENSMUST00000113634 534 ntTSL 2 BASIC12.71□□□□□ -0.37
Syngap1F6SEU4 Gm9673-201ENSMUST00000119287 781 ntBASIC12.71□□□□□ -0.37
Syngap1F6SEU4 Gm12461-201ENSMUST00000120231 1239 ntBASIC12.71□□□□□ -0.37
Syngap1F6SEU4 Gm12791-201ENSMUST00000120788 655 ntBASIC12.71□□□□□ -0.37
Syngap1F6SEU4 Gm15196-201ENSMUST00000121406 482 ntBASIC12.71□□□□□ -0.37
Syngap1F6SEU4 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Syngap1F6SEU4 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC12.71□□□□□ -0.37
Syngap1F6SEU4 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC12.71□□□□□ -0.37
Syngap1F6SEU4 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Syngap1F6SEU4 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Syngap1F6SEU4 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC12.71□□□□□ -0.37
Syngap1F6SEU4 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC12.71□□□□□ -0.37
Syngap1F6SEU4 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Syngap1F6SEU4 Gm9081-201ENSMUST00000182346 991 ntBASIC12.71□□□□□ -0.37
Syngap1F6SEU4 Wbp1-209ENSMUST00000205023 716 ntBASIC12.71□□□□□ -0.37
Syngap1F6SEU4 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Syngap1F6SEU4 AC162938.2-202ENSMUST00000215497 722 ntTSL 5 BASIC12.71□□□□□ -0.37
Syngap1F6SEU4 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Syngap1F6SEU4 Olfr435-201ENSMUST00000058118 942 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Syngap1F6SEU4 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Syngap1F6SEU4 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
Syngap1F6SEU4 Gm45776-201ENSMUST00000212366 1522 ntBASIC12.71□□□□□ -0.37
Syngap1F6SEU4 AC130823.1-201ENSMUST00000228929 1549 ntBASIC12.71□□□□□ -0.37
Syngap1F6SEU4 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.37
Syngap1F6SEU4 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Syngap1F6SEU4 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
Syngap1F6SEU4 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC12.71□□□□□ -0.37
Syngap1F6SEU4 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Syngap1F6SEU4 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.71□□□□□ -0.37
Syngap1F6SEU4 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Syngap1F6SEU4 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Syngap1F6SEU4 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Syngap1F6SEU4 Gm7701-201ENSMUST00000163185 1479 ntBASIC12.71□□□□□ -0.37
Syngap1F6SEU4 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Syngap1F6SEU4 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Syngap1F6SEU4 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Syngap1F6SEU4 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Syngap1F6SEU4 Gm43984-201ENSMUST00000204572 2864 ntBASIC12.71□□□□□ -0.38
Syngap1F6SEU4 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Syngap1F6SEU4 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms