Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cldn9Q9Z0S7 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cldn9Q9Z0S7 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC10.83□□□□□ -0.68
Cldn9Q9Z0S7 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cldn9Q9Z0S7 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Cldn9Q9Z0S7 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cldn9Q9Z0S7 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cldn9Q9Z0S7 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC10.82□□□□□ -0.68
Cldn9Q9Z0S7 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cldn9Q9Z0S7 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cldn9Q9Z0S7 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cldn9Q9Z0S7 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cldn9Q9Z0S7 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cldn9Q9Z0S7 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC10.82□□□□□ -0.68
Cldn9Q9Z0S7 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
Cldn9Q9Z0S7 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cldn9Q9Z0S7 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC10.82□□□□□ -0.68
Cldn9Q9Z0S7 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cldn9Q9Z0S7 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cldn9Q9Z0S7 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cldn9Q9Z0S7 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cldn9Q9Z0S7 Gm9915-201ENSMUST00000066196 1383 ntBASIC10.82□□□□□ -0.68
Cldn9Q9Z0S7 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cldn9Q9Z0S7 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cldn9Q9Z0S7 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cldn9Q9Z0S7 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cldn9Q9Z0S7 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cldn9Q9Z0S7 Gm12165-201ENSMUST00000117047 342 ntBASIC10.82□□□□□ -0.68
Cldn9Q9Z0S7 Gm8876-201ENSMUST00000120768 1122 ntBASIC10.82□□□□□ -0.68
Cldn9Q9Z0S7 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC10.82□□□□□ -0.68
Cldn9Q9Z0S7 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Cldn9Q9Z0S7 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cldn9Q9Z0S7 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Cldn9Q9Z0S7 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Cldn9Q9Z0S7 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Cldn9Q9Z0S7 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Cldn9Q9Z0S7 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC10.82□□□□□ -0.68
Cldn9Q9Z0S7 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC10.82□□□□□ -0.68
Cldn9Q9Z0S7 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC10.82□□□□□ -0.68
Cldn9Q9Z0S7 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC10.82□□□□□ -0.68
Cldn9Q9Z0S7 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Cldn9Q9Z0S7 Gm7207-201ENSMUST00000211575 1067 ntBASIC10.82□□□□□ -0.68
Cldn9Q9Z0S7 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cldn9Q9Z0S7 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cldn9Q9Z0S7 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Cldn9Q9Z0S7 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Cldn9Q9Z0S7 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cldn9Q9Z0S7 AC174797.1-201ENSMUST00000224339 1649 ntBASIC10.82□□□□□ -0.68
Cldn9Q9Z0S7 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cldn9Q9Z0S7 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Cldn9Q9Z0S7 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Cldn9Q9Z0S7 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Cldn9Q9Z0S7 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Cldn9Q9Z0S7 AC166836.1-201ENSMUST00000219933 1795 ntBASIC10.82□□□□□ -0.68
Cldn9Q9Z0S7 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC10.82□□□□□ -0.68
Cldn9Q9Z0S7 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cldn9Q9Z0S7 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cldn9Q9Z0S7 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cldn9Q9Z0S7 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cldn9Q9Z0S7 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cldn9Q9Z0S7 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cldn9Q9Z0S7 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cldn9Q9Z0S7 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cldn9Q9Z0S7 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cldn9Q9Z0S7 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cldn9Q9Z0S7 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Cldn9Q9Z0S7 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cldn9Q9Z0S7 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cldn9Q9Z0S7 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC10.81□□□□□ -0.68
Cldn9Q9Z0S7 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cldn9Q9Z0S7 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
Cldn9Q9Z0S7 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC10.81□□□□□ -0.68
Cldn9Q9Z0S7 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Cldn9Q9Z0S7 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cldn9Q9Z0S7 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC10.81□□□□□ -0.68
Cldn9Q9Z0S7 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Cldn9Q9Z0S7 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cldn9Q9Z0S7 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cldn9Q9Z0S7 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cldn9Q9Z0S7 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cldn9Q9Z0S7 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cldn9Q9Z0S7 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cldn9Q9Z0S7 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
Cldn9Q9Z0S7 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cldn9Q9Z0S7 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cldn9Q9Z0S7 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cldn9Q9Z0S7 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cldn9Q9Z0S7 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cldn9Q9Z0S7 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cldn9Q9Z0S7 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cldn9Q9Z0S7 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cldn9Q9Z0S7 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cldn9Q9Z0S7 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Cldn9Q9Z0S7 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Cldn9Q9Z0S7 Gm15615-201ENSMUST00000118876 198 ntBASIC10.81□□□□□ -0.68
Cldn9Q9Z0S7 Gm16219-201ENSMUST00000120096 274 ntBASIC10.81□□□□□ -0.68
Cldn9Q9Z0S7 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC10.81□□□□□ -0.68
Cldn9Q9Z0S7 Gm13328-201ENSMUST00000120816 1020 ntBASIC10.81□□□□□ -0.68
Cldn9Q9Z0S7 Gm11836-201ENSMUST00000121022 441 ntBASIC10.81□□□□□ -0.68
Cldn9Q9Z0S7 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms