Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Gm5302-201ENSMUST00000202130 796 ntBASIC10.97□□□□□ -0.65
Cdh17Q9R100 Gm18212-201ENSMUST00000211678 889 ntBASIC10.97□□□□□ -0.65
Cdh17Q9R100 Gm5369-201ENSMUST00000217499 588 ntBASIC10.97□□□□□ -0.65
Cdh17Q9R100 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC10.97□□□□□ -0.65
Cdh17Q9R100 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdh17Q9R100 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdh17Q9R100 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cdh17Q9R100 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdh17Q9R100 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdh17Q9R100 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC10.97□□□□□ -0.65
Cdh17Q9R100 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdh17Q9R100 Gm6903-201ENSMUST00000160509 1366 ntBASIC10.97□□□□□ -0.65
Cdh17Q9R100 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdh17Q9R100 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC10.97□□□□□ -0.65
Cdh17Q9R100 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Cdh17Q9R100 Gm18210-201ENSMUST00000209001 1524 ntBASIC10.97□□□□□ -0.65
Cdh17Q9R100 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdh17Q9R100 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdh17Q9R100 Gm18262-201ENSMUST00000222560 1946 ntBASIC10.97□□□□□ -0.65
Cdh17Q9R100 Gm44369-201ENSMUST00000204543 2175 ntBASIC10.97□□□□□ -0.65
Cdh17Q9R100 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC10.97□□□□□ -0.65
Cdh17Q9R100 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Cdh17Q9R100 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdh17Q9R100 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdh17Q9R100 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdh17Q9R100 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdh17Q9R100 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdh17Q9R100 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Cdh17Q9R100 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Cdh17Q9R100 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cdh17Q9R100 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cdh17Q9R100 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cdh17Q9R100 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cdh17Q9R100 AC124732.3-201ENSMUST00000221835 1765 ntBASIC10.96□□□□□ -0.65
Cdh17Q9R100 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cdh17Q9R100 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cdh17Q9R100 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC10.96□□□□□ -0.65
Cdh17Q9R100 CU062626.3-201ENSMUST00000225522 1411 ntBASIC10.96□□□□□ -0.65
Cdh17Q9R100 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cdh17Q9R100 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Cdh17Q9R100 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cdh17Q9R100 Gm22711-201ENSMUST00000116890 133 ntBASIC10.96□□□□□ -0.65
Cdh17Q9R100 Gm12218-201ENSMUST00000117666 399 ntBASIC10.96□□□□□ -0.65
Cdh17Q9R100 Gm13809-201ENSMUST00000117921 597 ntBASIC10.96□□□□□ -0.65
Cdh17Q9R100 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC10.96□□□□□ -0.65
Cdh17Q9R100 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC10.96□□□□□ -0.65
Cdh17Q9R100 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC10.96□□□□□ -0.65
Cdh17Q9R100 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cdh17Q9R100 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cdh17Q9R100 Gm24074-201ENSMUST00000158178 260 ntBASIC10.96□□□□□ -0.65
Cdh17Q9R100 Gm7741-201ENSMUST00000181445 989 ntBASIC10.96□□□□□ -0.65
Cdh17Q9R100 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC10.96□□□□□ -0.65
Cdh17Q9R100 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC10.96□□□□□ -0.65
Cdh17Q9R100 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC10.96□□□□□ -0.65
Cdh17Q9R100 Gm45909-201ENSMUST00000212413 1031 ntBASIC10.96□□□□□ -0.65
Cdh17Q9R100 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cdh17Q9R100 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC10.96□□□□□ -0.65
Cdh17Q9R100 CT009713.8-201ENSMUST00000225448 560 ntBASIC10.96□□□□□ -0.65
Cdh17Q9R100 CT025694.1-201ENSMUST00000226188 934 ntBASIC10.96□□□□□ -0.65
Cdh17Q9R100 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cdh17Q9R100 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC10.96□□□□□ -0.65
Cdh17Q9R100 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cdh17Q9R100 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cdh17Q9R100 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cdh17Q9R100 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cdh17Q9R100 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cdh17Q9R100 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cdh17Q9R100 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cdh17Q9R100 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Cdh17Q9R100 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cdh17Q9R100 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cdh17Q9R100 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cdh17Q9R100 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cdh17Q9R100 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC10.96□□□□□ -0.66
Cdh17Q9R100 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Cdh17Q9R100 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh17Q9R100 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh17Q9R100 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh17Q9R100 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC10.95□□□□□ -0.66
Cdh17Q9R100 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC10.95□□□□□ -0.66
Cdh17Q9R100 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh17Q9R100 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh17Q9R100 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh17Q9R100 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh17Q9R100 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh17Q9R100 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh17Q9R100 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh17Q9R100 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh17Q9R100 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh17Q9R100 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC10.95□□□□□ -0.66
Cdh17Q9R100 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC10.95□□□□□ -0.66
Cdh17Q9R100 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC10.95□□□□□ -0.66
Cdh17Q9R100 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Cdh17Q9R100 Gm8111-201ENSMUST00000117659 987 ntBASIC10.95□□□□□ -0.66
Cdh17Q9R100 Gm11941-201ENSMUST00000119904 610 ntBASIC10.95□□□□□ -0.66
Cdh17Q9R100 Gm11450-201ENSMUST00000121144 333 ntBASIC10.95□□□□□ -0.66
Cdh17Q9R100 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC10.95□□□□□ -0.66
Cdh17Q9R100 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh17Q9R100 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC10.95□□□□□ -0.66
Cdh17Q9R100 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms