Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Chmp2aQ9DB34 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chmp2aQ9DB34 Gm5879-201ENSMUST00000089501 1209 ntBASIC11.76□□□□□ -0.53
Chmp2aQ9DB34 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chmp2aQ9DB34 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Chmp2aQ9DB34 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chmp2aQ9DB34 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Chmp2aQ9DB34 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Chmp2aQ9DB34 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Chmp2aQ9DB34 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Chmp2aQ9DB34 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chmp2aQ9DB34 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Chmp2aQ9DB34 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chmp2aQ9DB34 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11.76□□□□□ -0.53
Chmp2aQ9DB34 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC11.76□□□□□ -0.53
Chmp2aQ9DB34 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chmp2aQ9DB34 Msh3-202ENSMUST00000185852 3946 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chmp2aQ9DB34 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chmp2aQ9DB34 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chmp2aQ9DB34 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC11.76□□□□□ -0.53
Chmp2aQ9DB34 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chmp2aQ9DB34 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chmp2aQ9DB34 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chmp2aQ9DB34 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chmp2aQ9DB34 Nudt13-207ENSMUST00000224311 1574 ntBASIC11.75□□□□□ -0.53
Chmp2aQ9DB34 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.75□□□□□ -0.53
Chmp2aQ9DB34 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chmp2aQ9DB34 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Chmp2aQ9DB34 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Chmp2aQ9DB34 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chmp2aQ9DB34 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chmp2aQ9DB34 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Chmp2aQ9DB34 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
Chmp2aQ9DB34 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chmp2aQ9DB34 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Chmp2aQ9DB34 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Chmp2aQ9DB34 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chmp2aQ9DB34 Gm23272-201ENSMUST00000104053 129 ntBASIC11.75□□□□□ -0.53
Chmp2aQ9DB34 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chmp2aQ9DB34 Gm16071-201ENSMUST00000119589 793 ntBASIC11.75□□□□□ -0.53
Chmp2aQ9DB34 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chmp2aQ9DB34 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Chmp2aQ9DB34 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Chmp2aQ9DB34 Olfml3-204ENSMUST00000169286 874 ntBASIC11.75□□□□□ -0.53
Chmp2aQ9DB34 Gm23771-201ENSMUST00000178702 110 ntBASIC11.75□□□□□ -0.53
Chmp2aQ9DB34 Gm23694-201ENSMUST00000179335 110 ntBASIC11.75□□□□□ -0.53
Chmp2aQ9DB34 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chmp2aQ9DB34 Gm29164-201ENSMUST00000185454 1024 ntBASIC11.75□□□□□ -0.53
Chmp2aQ9DB34 Gm17826-201ENSMUST00000189720 798 ntBASIC11.75□□□□□ -0.53
Chmp2aQ9DB34 Gm37299-201ENSMUST00000193951 826 ntBASIC11.75□□□□□ -0.53
Chmp2aQ9DB34 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC11.75□□□□□ -0.53
Chmp2aQ9DB34 Gm44980-201ENSMUST00000205826 314 ntBASIC11.75□□□□□ -0.53
Chmp2aQ9DB34 Gm10109-202ENSMUST00000206890 1211 ntBASIC11.75□□□□□ -0.53
Chmp2aQ9DB34 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC11.75□□□□□ -0.53
Chmp2aQ9DB34 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC11.75□□□□□ -0.53
Chmp2aQ9DB34 Gm45856-201ENSMUST00000212752 416 ntBASIC11.75□□□□□ -0.53
Chmp2aQ9DB34 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC11.75□□□□□ -0.53
Chmp2aQ9DB34 CT030170.2-201ENSMUST00000223267 126 ntBASIC11.75□□□□□ -0.53
Chmp2aQ9DB34 AC154680.1-201ENSMUST00000224376 859 ntBASIC11.75□□□□□ -0.53
Chmp2aQ9DB34 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chmp2aQ9DB34 Gm9826-201ENSMUST00000029124 1299 ntBASIC11.75□□□□□ -0.53
Chmp2aQ9DB34 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chmp2aQ9DB34 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chmp2aQ9DB34 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chmp2aQ9DB34 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chmp2aQ9DB34 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Chmp2aQ9DB34 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chmp2aQ9DB34 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Chmp2aQ9DB34 Gm29358-202ENSMUST00000187941 3227 ntBASIC11.75□□□□□ -0.53
Chmp2aQ9DB34 Gm28424-201ENSMUST00000187393 1319 ntBASIC11.75□□□□□ -0.53
Chmp2aQ9DB34 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chmp2aQ9DB34 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chmp2aQ9DB34 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Chmp2aQ9DB34 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC11.75□□□□□ -0.53
Chmp2aQ9DB34 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chmp2aQ9DB34 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Chmp2aQ9DB34 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Chmp2aQ9DB34 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chmp2aQ9DB34 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chmp2aQ9DB34 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chmp2aQ9DB34 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chmp2aQ9DB34 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chmp2aQ9DB34 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chmp2aQ9DB34 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chmp2aQ9DB34 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp2aQ9DB34 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp2aQ9DB34 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC11.74□□□□□ -0.53
Chmp2aQ9DB34 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp2aQ9DB34 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp2aQ9DB34 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC11.74□□□□□ -0.53
Chmp2aQ9DB34 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp2aQ9DB34 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp2aQ9DB34 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp2aQ9DB34 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp2aQ9DB34 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp2aQ9DB34 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp2aQ9DB34 Gm14314-201ENSMUST00000118225 1015 ntBASIC11.74□□□□□ -0.53
Chmp2aQ9DB34 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC11.74□□□□□ -0.53
Chmp2aQ9DB34 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp2aQ9DB34 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms