Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sf3a3Q9D554 Osgep-202ENSMUST00000159292 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sf3a3Q9D554 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Sf3a3Q9D554 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sf3a3Q9D554 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sf3a3Q9D554 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sf3a3Q9D554 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sf3a3Q9D554 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.33□□□□□ -0.6
Sf3a3Q9D554 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Sf3a3Q9D554 Rint1-203ENSMUST00000115113 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sf3a3Q9D554 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sf3a3Q9D554 Dcun1d4-201ENSMUST00000063882 4116 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sf3a3Q9D554 Rbp1-201ENSMUST00000052068 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sf3a3Q9D554 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC11.32□□□□□ -0.6
Sf3a3Q9D554 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sf3a3Q9D554 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC11.32□□□□□ -0.6
Sf3a3Q9D554 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC11.32□□□□□ -0.6
Sf3a3Q9D554 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Sf3a3Q9D554 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sf3a3Q9D554 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sf3a3Q9D554 Phf8-202ENSMUST00000046962 3105 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sf3a3Q9D554 Daam2-201ENSMUST00000057610 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sf3a3Q9D554 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sf3a3Q9D554 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sf3a3Q9D554 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sf3a3Q9D554 Fadd-201ENSMUST00000033394 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sf3a3Q9D554 Eng-205ENSMUST00000167841 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sf3a3Q9D554 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sf3a3Q9D554 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sf3a3Q9D554 Gm24548-201ENSMUST00000158650 108 ntBASIC11.32□□□□□ -0.6
Sf3a3Q9D554 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC11.32□□□□□ -0.6
Sf3a3Q9D554 Gm9002-201ENSMUST00000178437 499 ntBASIC11.32□□□□□ -0.6
Sf3a3Q9D554 Gm43118-201ENSMUST00000199149 775 ntBASIC11.32□□□□□ -0.6
Sf3a3Q9D554 Gm4607-201ENSMUST00000206649 577 ntBASIC11.32□□□□□ -0.6
Sf3a3Q9D554 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC11.32□□□□□ -0.6
Sf3a3Q9D554 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC11.32□□□□□ -0.6
Sf3a3Q9D554 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.32□□□□□ -0.6
Sf3a3Q9D554 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sf3a3Q9D554 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sf3a3Q9D554 Tcn2-206ENSMUST00000109992 1945 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Sf3a3Q9D554 Zfp940-202ENSMUST00000108223 2560 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sf3a3Q9D554 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC11.32□□□□□ -0.6
Sf3a3Q9D554 Cbfa2t3-203ENSMUST00000127984 7645 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sf3a3Q9D554 Mkl1-204ENSMUST00000134469 4392 ntTSL 5 BASIC11.32□□□□□ -0.6
Sf3a3Q9D554 Ank1-205ENSMUST00000117296 6794 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sf3a3Q9D554 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sf3a3Q9D554 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sf3a3Q9D554 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sf3a3Q9D554 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sf3a3Q9D554 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sf3a3Q9D554 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sf3a3Q9D554 Polq-202ENSMUST00000071452 7290 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Sf3a3Q9D554 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sf3a3Q9D554 Helz-201ENSMUST00000075012 6218 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sf3a3Q9D554 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Sf3a3Q9D554 St6galnac4-201ENSMUST00000102818 3626 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sf3a3Q9D554 Gm28268-201ENSMUST00000188966 2528 ntTSL 5 BASIC11.31□□□□□ -0.6
Sf3a3Q9D554 Suclg2-204ENSMUST00000204224 3367 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sf3a3Q9D554 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sf3a3Q9D554 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Sf3a3Q9D554 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sf3a3Q9D554 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC11.31□□□□□ -0.6
Sf3a3Q9D554 Gm15806-201ENSMUST00000120696 955 ntBASIC11.31□□□□□ -0.6
Sf3a3Q9D554 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Sf3a3Q9D554 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sf3a3Q9D554 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC11.31□□□□□ -0.6
Sf3a3Q9D554 Gm3329-201ENSMUST00000159873 556 ntBASIC11.31□□□□□ -0.6
Sf3a3Q9D554 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Sf3a3Q9D554 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC11.31□□□□□ -0.6
Sf3a3Q9D554 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Sf3a3Q9D554 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Sf3a3Q9D554 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC11.31□□□□□ -0.6
Sf3a3Q9D554 Gm43966-201ENSMUST00000203301 612 ntBASIC11.31□□□□□ -0.6
Sf3a3Q9D554 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11.31□□□□□ -0.6
Sf3a3Q9D554 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sf3a3Q9D554 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sf3a3Q9D554 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sf3a3Q9D554 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sf3a3Q9D554 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Sf3a3Q9D554 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sf3a3Q9D554 Extl1-201ENSMUST00000030643 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sf3a3Q9D554 Gm6124-201ENSMUST00000188240 2580 ntBASIC11.31□□□□□ -0.6
Sf3a3Q9D554 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Sf3a3Q9D554 Zbtb25-202ENSMUST00000176102 2707 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Sf3a3Q9D554 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sf3a3Q9D554 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sf3a3Q9D554 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sf3a3Q9D554 Zfp92-201ENSMUST00000033740 5767 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sf3a3Q9D554 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Sf3a3Q9D554 Gm38357-201ENSMUST00000195382 2464 ntBASIC11.31□□□□□ -0.6
Sf3a3Q9D554 Kcnv1-201ENSMUST00000022967 4389 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sf3a3Q9D554 Wwtr1-202ENSMUST00000120977 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sf3a3Q9D554 Slc45a3-202ENSMUST00000177943 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sf3a3Q9D554 Amph-201ENSMUST00000003345 3367 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sf3a3Q9D554 Atp11c-202ENSMUST00000101527 6044 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sf3a3Q9D554 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC11.31□□□□□ -0.6
Sf3a3Q9D554 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sf3a3Q9D554 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC11.31□□□□□ -0.6
Sf3a3Q9D554 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Sf3a3Q9D554 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms