Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC11.87□□□□□ -0.51
Ddx56Q9D0R4 Gm15991-202ENSMUST00000212123 3565 ntBASIC11.87□□□□□ -0.51
Ddx56Q9D0R4 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ddx56Q9D0R4 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ddx56Q9D0R4 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Ddx56Q9D0R4 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ddx56Q9D0R4 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ddx56Q9D0R4 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Ddx56Q9D0R4 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ddx56Q9D0R4 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ddx56Q9D0R4 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ddx56Q9D0R4 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Ddx56Q9D0R4 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ddx56Q9D0R4 Snord17-201ENSMUST00000104526 238 ntBASIC11.87□□□□□ -0.51
Ddx56Q9D0R4 Gm16219-201ENSMUST00000120096 274 ntBASIC11.87□□□□□ -0.51
Ddx56Q9D0R4 Gm12566-201ENSMUST00000121479 359 ntBASIC11.87□□□□□ -0.51
Ddx56Q9D0R4 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC11.87□□□□□ -0.51
Ddx56Q9D0R4 Gm4726-201ENSMUST00000135604 736 ntBASIC11.87□□□□□ -0.51
Ddx56Q9D0R4 Gm10051-201ENSMUST00000145209 414 ntBASIC11.87□□□□□ -0.51
Ddx56Q9D0R4 Gm6019-201ENSMUST00000148369 736 ntBASIC11.87□□□□□ -0.51
Ddx56Q9D0R4 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC11.87□□□□□ -0.51
Ddx56Q9D0R4 Gm21778-201ENSMUST00000178779 471 ntBASIC11.87□□□□□ -0.51
Ddx56Q9D0R4 Gm43058-201ENSMUST00000197645 625 ntBASIC11.87□□□□□ -0.51
Ddx56Q9D0R4 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC11.87□□□□□ -0.51
Ddx56Q9D0R4 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC11.87□□□□□ -0.51
Ddx56Q9D0R4 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC11.87□□□□□ -0.51
Ddx56Q9D0R4 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ddx56Q9D0R4 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC11.87□□□□□ -0.51
Ddx56Q9D0R4 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ddx56Q9D0R4 Abhd11os-203ENSMUST00000222613 363 ntBASIC11.87□□□□□ -0.51
Ddx56Q9D0R4 CT030170.2-201ENSMUST00000223267 126 ntBASIC11.87□□□□□ -0.51
Ddx56Q9D0R4 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ddx56Q9D0R4 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Ddx56Q9D0R4 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC11.87□□□□□ -0.51
Ddx56Q9D0R4 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ddx56Q9D0R4 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ddx56Q9D0R4 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ddx56Q9D0R4 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ddx56Q9D0R4 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ddx56Q9D0R4 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC11.87□□□□□ -0.51
Ddx56Q9D0R4 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC11.87□□□□□ -0.51
Ddx56Q9D0R4 Pla2g5-201ENSMUST00000030524 2131 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ddx56Q9D0R4 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ddx56Q9D0R4 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ddx56Q9D0R4 Gm36987-201ENSMUST00000194704 2979 ntBASIC11.87□□□□□ -0.51
Ddx56Q9D0R4 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Ddx56Q9D0R4 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ddx56Q9D0R4 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ddx56Q9D0R4 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ddx56Q9D0R4 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ddx56Q9D0R4 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ddx56Q9D0R4 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Ddx56Q9D0R4 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Ddx56Q9D0R4 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ddx56Q9D0R4 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC11.87□□□□□ -0.51
Ddx56Q9D0R4 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ddx56Q9D0R4 Gm21998-201ENSMUST00000117552 1308 ntBASIC11.86□□□□□ -0.51
Ddx56Q9D0R4 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ddx56Q9D0R4 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ddx56Q9D0R4 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ddx56Q9D0R4 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Ddx56Q9D0R4 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ddx56Q9D0R4 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ddx56Q9D0R4 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Ddx56Q9D0R4 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Ddx56Q9D0R4 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ddx56Q9D0R4 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Ddx56Q9D0R4 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ddx56Q9D0R4 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ddx56Q9D0R4 Gm12218-201ENSMUST00000117666 399 ntBASIC11.86□□□□□ -0.51
Ddx56Q9D0R4 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC11.86□□□□□ -0.51
Ddx56Q9D0R4 Gm15432-201ENSMUST00000121106 195 ntBASIC11.86□□□□□ -0.51
Ddx56Q9D0R4 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC11.86□□□□□ -0.51
Ddx56Q9D0R4 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ddx56Q9D0R4 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Ddx56Q9D0R4 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Ddx56Q9D0R4 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Ddx56Q9D0R4 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Ddx56Q9D0R4 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Ddx56Q9D0R4 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ddx56Q9D0R4 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC11.86□□□□□ -0.51
Ddx56Q9D0R4 Gm33366-201ENSMUST00000195583 3827 ntBASIC11.86□□□□□ -0.51
Ddx56Q9D0R4 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC11.86□□□□□ -0.51
Ddx56Q9D0R4 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ddx56Q9D0R4 Gm17831-201ENSMUST00000205579 900 ntBASIC11.86□□□□□ -0.51
Ddx56Q9D0R4 AC155637.1-201ENSMUST00000218560 636 ntBASIC11.86□□□□□ -0.51
Ddx56Q9D0R4 CT025602.2-201ENSMUST00000226553 772 ntBASIC11.86□□□□□ -0.51
Ddx56Q9D0R4 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ddx56Q9D0R4 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ddx56Q9D0R4 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ddx56Q9D0R4 Gm9915-201ENSMUST00000066196 1383 ntBASIC11.86□□□□□ -0.51
Ddx56Q9D0R4 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC11.86□□□□□ -0.51
Ddx56Q9D0R4 Gm44153-201ENSMUST00000204162 1580 ntBASIC11.86□□□□□ -0.51
Ddx56Q9D0R4 Gm21358-201ENSMUST00000191645 1659 ntBASIC11.86□□□□□ -0.51
Ddx56Q9D0R4 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC11.86□□□□□ -0.51
Ddx56Q9D0R4 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ddx56Q9D0R4 Gm10548-201ENSMUST00000097631 2629 ntBASIC11.86□□□□□ -0.51
Ddx56Q9D0R4 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ddx56Q9D0R4 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Ddx56Q9D0R4 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms