Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Otud1Q9CUB6 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC10.85□□□□□ -0.67
Otud1Q9CUB6 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Otud1Q9CUB6 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Otud1Q9CUB6 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Otud1Q9CUB6 Hbp1-206ENSMUST00000176103 1319 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Otud1Q9CUB6 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Otud1Q9CUB6 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC10.84□□□□□ -0.67
Otud1Q9CUB6 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Otud1Q9CUB6 Gm44190-201ENSMUST00000205083 1401 ntBASIC10.84□□□□□ -0.67
Otud1Q9CUB6 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Otud1Q9CUB6 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Otud1Q9CUB6 Gm9544-201ENSMUST00000223349 2482 ntBASIC10.84□□□□□ -0.67
Otud1Q9CUB6 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Otud1Q9CUB6 Milr1-202ENSMUST00000106794 1514 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Otud1Q9CUB6 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Otud1Q9CUB6 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Otud1Q9CUB6 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Otud1Q9CUB6 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Otud1Q9CUB6 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Otud1Q9CUB6 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Otud1Q9CUB6 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Otud1Q9CUB6 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Otud1Q9CUB6 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Otud1Q9CUB6 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC10.84□□□□□ -0.67
Otud1Q9CUB6 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Otud1Q9CUB6 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Otud1Q9CUB6 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Otud1Q9CUB6 Gm14525-201ENSMUST00000119649 893 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Otud1Q9CUB6 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC10.84□□□□□ -0.67
Otud1Q9CUB6 D6Ertd474e-203ENSMUST00000160188 683 ntTSL 3 BASIC10.84□□□□□ -0.67
Otud1Q9CUB6 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Otud1Q9CUB6 Eloc-206ENSMUST00000186948 641 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Otud1Q9CUB6 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC10.84□□□□□ -0.67
Otud1Q9CUB6 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC10.84□□□□□ -0.67
Otud1Q9CUB6 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC10.84□□□□□ -0.67
Otud1Q9CUB6 Csn2-204ENSMUST00000196869 879 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Otud1Q9CUB6 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC10.84□□□□□ -0.67
Otud1Q9CUB6 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC10.84□□□□□ -0.67
Otud1Q9CUB6 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC10.84□□□□□ -0.67
Otud1Q9CUB6 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Otud1Q9CUB6 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC10.84□□□□□ -0.67
Otud1Q9CUB6 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Otud1Q9CUB6 Gm5451-201ENSMUST00000080545 579 ntBASIC10.84□□□□□ -0.67
Otud1Q9CUB6 Mterf1a-201ENSMUST00000044746 1376 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Otud1Q9CUB6 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Otud1Q9CUB6 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Otud1Q9CUB6 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Otud1Q9CUB6 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Otud1Q9CUB6 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
Otud1Q9CUB6 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Otud1Q9CUB6 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Otud1Q9CUB6 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Otud1Q9CUB6 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Otud1Q9CUB6 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Otud1Q9CUB6 CT010447.1-201ENSMUST00000225657 1608 ntBASIC10.84□□□□□ -0.67
Otud1Q9CUB6 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Otud1Q9CUB6 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Otud1Q9CUB6 Gm5403-201ENSMUST00000117105 2795 ntBASIC10.83□□□□□ -0.68
Otud1Q9CUB6 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Otud1Q9CUB6 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC10.83□□□□□ -0.68
Otud1Q9CUB6 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Otud1Q9CUB6 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Otud1Q9CUB6 AC154404.1-201ENSMUST00000223601 2077 ntBASIC10.83□□□□□ -0.68
Otud1Q9CUB6 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Otud1Q9CUB6 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Otud1Q9CUB6 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Otud1Q9CUB6 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Otud1Q9CUB6 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Otud1Q9CUB6 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC10.83□□□□□ -0.68
Otud1Q9CUB6 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Otud1Q9CUB6 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Otud1Q9CUB6 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Otud1Q9CUB6 AC126257.2-201ENSMUST00000215507 2300 ntBASIC10.83□□□□□ -0.68
Otud1Q9CUB6 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Otud1Q9CUB6 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC10.83□□□□□ -0.68
Otud1Q9CUB6 Gm8111-201ENSMUST00000117659 987 ntBASIC10.83□□□□□ -0.68
Otud1Q9CUB6 Gm11892-201ENSMUST00000117711 1202 ntBASIC10.83□□□□□ -0.68
Otud1Q9CUB6 Gm12899-201ENSMUST00000120565 551 ntBASIC10.83□□□□□ -0.68
Otud1Q9CUB6 Gm11233-201ENSMUST00000122357 634 ntBASIC10.83□□□□□ -0.68
Otud1Q9CUB6 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Otud1Q9CUB6 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Otud1Q9CUB6 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC10.83□□□□□ -0.68
Otud1Q9CUB6 4930471M09Rik-201ENSMUST00000181849 1112 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Otud1Q9CUB6 Pou1f1-205ENSMUST00000184525 1020 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Otud1Q9CUB6 6030460B20Rik-201ENSMUST00000191764 1058 ntBASIC10.83□□□□□ -0.68
Otud1Q9CUB6 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC10.83□□□□□ -0.68
Otud1Q9CUB6 1700047N06Rik-201ENSMUST00000194474 920 ntBASIC10.83□□□□□ -0.68
Otud1Q9CUB6 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
Otud1Q9CUB6 Gm43646-201ENSMUST00000199962 464 ntTSL 3 BASIC10.83□□□□□ -0.68
Otud1Q9CUB6 Gm42723-202ENSMUST00000200561 1254 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Otud1Q9CUB6 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC10.83□□□□□ -0.68
Otud1Q9CUB6 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC10.83□□□□□ -0.68
Otud1Q9CUB6 Gm7238-201ENSMUST00000206467 973 ntBASIC10.83□□□□□ -0.68
Otud1Q9CUB6 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC10.83□□□□□ -0.68
Otud1Q9CUB6 AC165260.2-203ENSMUST00000224237 336 ntBASIC10.83□□□□□ -0.68
Otud1Q9CUB6 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Otud1Q9CUB6 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Otud1Q9CUB6 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Otud1Q9CUB6 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms