Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Mir6958-201ENSMUST00000184207 73 ntBASIC11.38□□□□□ -0.59
Lsm7Q9CQQ8 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC11.38□□□□□ -0.59
Lsm7Q9CQQ8 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Lsm7Q9CQQ8 Gm45120-201ENSMUST00000208880 408 ntBASIC11.38□□□□□ -0.59
Lsm7Q9CQQ8 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC11.38□□□□□ -0.59
Lsm7Q9CQQ8 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC11.38□□□□□ -0.59
Lsm7Q9CQQ8 CT030166.5-201ENSMUST00000222249 420 ntBASIC11.38□□□□□ -0.59
Lsm7Q9CQQ8 Ap3s1-202ENSMUST00000224622 978 ntBASIC11.38□□□□□ -0.59
Lsm7Q9CQQ8 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Lsm7Q9CQQ8 Gm5805-201ENSMUST00000072779 456 ntBASIC11.38□□□□□ -0.59
Lsm7Q9CQQ8 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lsm7Q9CQQ8 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lsm7Q9CQQ8 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lsm7Q9CQQ8 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
Lsm7Q9CQQ8 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
Lsm7Q9CQQ8 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lsm7Q9CQQ8 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lsm7Q9CQQ8 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Lsm7Q9CQQ8 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lsm7Q9CQQ8 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC11.38□□□□□ -0.59
Lsm7Q9CQQ8 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lsm7Q9CQQ8 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lsm7Q9CQQ8 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Lsm7Q9CQQ8 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC11.38□□□□□ -0.59
Lsm7Q9CQQ8 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC11.38□□□□□ -0.59
Lsm7Q9CQQ8 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Lsm7Q9CQQ8 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lsm7Q9CQQ8 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Lsm7Q9CQQ8 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Lsm7Q9CQQ8 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lsm7Q9CQQ8 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lsm7Q9CQQ8 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lsm7Q9CQQ8 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lsm7Q9CQQ8 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.37□□□□□ -0.59
Lsm7Q9CQQ8 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC11.37□□□□□ -0.59
Lsm7Q9CQQ8 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lsm7Q9CQQ8 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Lsm7Q9CQQ8 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Lsm7Q9CQQ8 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lsm7Q9CQQ8 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lsm7Q9CQQ8 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lsm7Q9CQQ8 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Lsm7Q9CQQ8 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Lsm7Q9CQQ8 Gm42463-201ENSMUST00000198041 4886 ntBASIC11.37□□□□□ -0.59
Lsm7Q9CQQ8 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lsm7Q9CQQ8 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Lsm7Q9CQQ8 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC11.37□□□□□ -0.59
Lsm7Q9CQQ8 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Lsm7Q9CQQ8 Gm9133-201ENSMUST00000118289 540 ntBASIC11.37□□□□□ -0.59
Lsm7Q9CQQ8 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Lsm7Q9CQQ8 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC11.37□□□□□ -0.59
Lsm7Q9CQQ8 Gm25554-201ENSMUST00000158075 113 ntBASIC11.37□□□□□ -0.59
Lsm7Q9CQQ8 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Lsm7Q9CQQ8 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC11.37□□□□□ -0.59
Lsm7Q9CQQ8 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC11.37□□□□□ -0.59
Lsm7Q9CQQ8 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lsm7Q9CQQ8 Gm9884-201ENSMUST00000194343 1222 ntBASIC11.37□□□□□ -0.59
Lsm7Q9CQQ8 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Lsm7Q9CQQ8 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC11.37□□□□□ -0.59
Lsm7Q9CQQ8 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC11.37□□□□□ -0.59
Lsm7Q9CQQ8 Gm45410-201ENSMUST00000211331 1093 ntBASIC11.37□□□□□ -0.59
Lsm7Q9CQQ8 Gm3619-201ENSMUST00000219947 775 ntBASIC11.37□□□□□ -0.59
Lsm7Q9CQQ8 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC11.37□□□□□ -0.59
Lsm7Q9CQQ8 AC153152.3-201ENSMUST00000222188 1135 ntBASIC11.37□□□□□ -0.59
Lsm7Q9CQQ8 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lsm7Q9CQQ8 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lsm7Q9CQQ8 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lsm7Q9CQQ8 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lsm7Q9CQQ8 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Lsm7Q9CQQ8 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
Lsm7Q9CQQ8 Gm44663-201ENSMUST00000206898 3150 ntBASIC11.37□□□□□ -0.59
Lsm7Q9CQQ8 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lsm7Q9CQQ8 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Lsm7Q9CQQ8 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lsm7Q9CQQ8 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lsm7Q9CQQ8 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lsm7Q9CQQ8 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lsm7Q9CQQ8 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC11.37□□□□□ -0.59
Lsm7Q9CQQ8 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lsm7Q9CQQ8 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lsm7Q9CQQ8 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Lsm7Q9CQQ8 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lsm7Q9CQQ8 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Lsm7Q9CQQ8 Gm43334-201ENSMUST00000197740 1318 ntBASIC11.36□□□□□ -0.59
Lsm7Q9CQQ8 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Lsm7Q9CQQ8 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Lsm7Q9CQQ8 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lsm7Q9CQQ8 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lsm7Q9CQQ8 Bloc1s5-201ENSMUST00000035899 5634 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lsm7Q9CQQ8 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC11.36□□□□□ -0.59
Lsm7Q9CQQ8 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lsm7Q9CQQ8 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Lsm7Q9CQQ8 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Lsm7Q9CQQ8 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lsm7Q9CQQ8 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lsm7Q9CQQ8 Gm4917-201ENSMUST00000121452 650 ntBASIC11.36□□□□□ -0.59
Lsm7Q9CQQ8 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC11.36□□□□□ -0.59
Lsm7Q9CQQ8 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC11.36□□□□□ -0.59
Lsm7Q9CQQ8 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC11.36□□□□□ -0.59
Lsm7Q9CQQ8 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms