Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
RtcbQ99LF4 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
RtcbQ99LF4 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RtcbQ99LF4 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RtcbQ99LF4 Prr16-201ENSMUST00000116639 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RtcbQ99LF4 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RtcbQ99LF4 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RtcbQ99LF4 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
RtcbQ99LF4 Prr27-202ENSMUST00000101056 1337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
RtcbQ99LF4 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RtcbQ99LF4 Prr27-201ENSMUST00000002310 1313 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
RtcbQ99LF4 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
RtcbQ99LF4 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13.92□□□□□ -0.18
RtcbQ99LF4 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
RtcbQ99LF4 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RtcbQ99LF4 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RtcbQ99LF4 Rubie-203ENSMUST00000227803 2430 ntBASIC13.92□□□□□ -0.18
RtcbQ99LF4 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RtcbQ99LF4 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RtcbQ99LF4 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RtcbQ99LF4 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
RtcbQ99LF4 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RtcbQ99LF4 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
RtcbQ99LF4 Bcl2l11-204ENSMUST00000103211 672 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
RtcbQ99LF4 Gm24933-201ENSMUST00000103762 110 ntBASIC13.92□□□□□ -0.18
RtcbQ99LF4 Gm23252-201ENSMUST00000103776 110 ntBASIC13.92□□□□□ -0.18
RtcbQ99LF4 Mrps36-203ENSMUST00000109333 701 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
RtcbQ99LF4 Cdk1-202ENSMUST00000119827 1253 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
RtcbQ99LF4 Gm16069-201ENSMUST00000131146 545 ntTSL 3 BASIC13.92□□□□□ -0.18
RtcbQ99LF4 Gm16305-201ENSMUST00000140747 556 ntBASIC13.92□□□□□ -0.18
RtcbQ99LF4 Gm26443-201ENSMUST00000179610 110 ntBASIC13.92□□□□□ -0.18
RtcbQ99LF4 Zcwpw2-203ENSMUST00000187803 372 ntBASIC13.92□□□□□ -0.18
RtcbQ99LF4 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC13.92□□□□□ -0.18
RtcbQ99LF4 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC13.92□□□□□ -0.18
RtcbQ99LF4 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RtcbQ99LF4 Gm44605-201ENSMUST00000206892 949 ntBASIC13.92□□□□□ -0.18
RtcbQ99LF4 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC13.92□□□□□ -0.18
RtcbQ99LF4 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC13.92□□□□□ -0.18
RtcbQ99LF4 Rps2-ps12-201ENSMUST00000214262 785 ntBASIC13.92□□□□□ -0.18
RtcbQ99LF4 Isca2-206ENSMUST00000222449 374 ntTSL 2 BASIC13.92□□□□□ -0.18
RtcbQ99LF4 Rhno1-207ENSMUST00000223237 1081 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
RtcbQ99LF4 AU016765-201ENSMUST00000097295 946 ntTSL 2 BASIC13.92□□□□□ -0.18
RtcbQ99LF4 Gm6157-201ENSMUST00000199935 1897 ntBASIC13.92□□□□□ -0.18
RtcbQ99LF4 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RtcbQ99LF4 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RtcbQ99LF4 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
RtcbQ99LF4 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
RtcbQ99LF4 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RtcbQ99LF4 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
RtcbQ99LF4 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RtcbQ99LF4 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
RtcbQ99LF4 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RtcbQ99LF4 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RtcbQ99LF4 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RtcbQ99LF4 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC13.92□□□□□ -0.18
RtcbQ99LF4 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
RtcbQ99LF4 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC13.92□□□□□ -0.18
RtcbQ99LF4 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RtcbQ99LF4 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RtcbQ99LF4 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RtcbQ99LF4 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RtcbQ99LF4 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RtcbQ99LF4 Fopnl-202ENSMUST00000120707 1414 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
RtcbQ99LF4 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RtcbQ99LF4 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC13.91□□□□□ -0.18
RtcbQ99LF4 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
RtcbQ99LF4 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC13.91□□□□□ -0.18
RtcbQ99LF4 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RtcbQ99LF4 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RtcbQ99LF4 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RtcbQ99LF4 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RtcbQ99LF4 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
RtcbQ99LF4 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RtcbQ99LF4 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RtcbQ99LF4 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
RtcbQ99LF4 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
RtcbQ99LF4 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC13.91□□□□□ -0.18
RtcbQ99LF4 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RtcbQ99LF4 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RtcbQ99LF4 CT010480.4-201ENSMUST00000224654 2283 ntBASIC13.91□□□□□ -0.18
RtcbQ99LF4 Mir1249-201ENSMUST00000116791 98 ntBASIC13.91□□□□□ -0.18
RtcbQ99LF4 Gm5944-201ENSMUST00000118182 1001 ntBASIC13.91□□□□□ -0.18
RtcbQ99LF4 Gm15886-201ENSMUST00000123155 1250 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RtcbQ99LF4 Gm12666-201ENSMUST00000123179 764 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
RtcbQ99LF4 St8sia3os-204ENSMUST00000140903 383 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RtcbQ99LF4 Gm12056-201ENSMUST00000148364 1257 ntTSL 5 BASIC13.91□□□□□ -0.18
RtcbQ99LF4 4930524O07Rik-202ENSMUST00000162334 293 ntTSL 2 BASIC13.91□□□□□ -0.18
RtcbQ99LF4 Gm4462-201ENSMUST00000166453 492 ntBASIC13.91□□□□□ -0.18
RtcbQ99LF4 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC13.91□□□□□ -0.18
RtcbQ99LF4 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
RtcbQ99LF4 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
RtcbQ99LF4 Chac2-201ENSMUST00000020553 1018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RtcbQ99LF4 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC13.91□□□□□ -0.18
RtcbQ99LF4 AC164429.1-201ENSMUST00000224210 518 ntBASIC13.91□□□□□ -0.18
RtcbQ99LF4 AC154213.1-201ENSMUST00000228234 583 ntBASIC13.91□□□□□ -0.18
RtcbQ99LF4 4930546C10Rik-201ENSMUST00000025428 363 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
RtcbQ99LF4 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC13.91□□□□□ -0.18
RtcbQ99LF4 Hax1-201ENSMUST00000079724 1139 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
RtcbQ99LF4 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RtcbQ99LF4 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms