Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdha3Q91Y16 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdha3Q91Y16 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Pcdha3Q91Y16 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdha3Q91Y16 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Pcdha3Q91Y16 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Pcdha3Q91Y16 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdha3Q91Y16 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Pcdha3Q91Y16 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdha3Q91Y16 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdha3Q91Y16 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdha3Q91Y16 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdha3Q91Y16 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdha3Q91Y16 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdha3Q91Y16 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdha3Q91Y16 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC11.82□□□□□ -0.52
Pcdha3Q91Y16 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdha3Q91Y16 Gm11949-201ENSMUST00000117640 372 ntBASIC11.82□□□□□ -0.52
Pcdha3Q91Y16 Gm11244-201ENSMUST00000121243 237 ntBASIC11.82□□□□□ -0.52
Pcdha3Q91Y16 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC11.82□□□□□ -0.52
Pcdha3Q91Y16 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdha3Q91Y16 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdha3Q91Y16 Gm45770-201ENSMUST00000212105 616 ntBASIC11.82□□□□□ -0.52
Pcdha3Q91Y16 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdha3Q91Y16 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC11.82□□□□□ -0.52
Pcdha3Q91Y16 CT030637.1-201ENSMUST00000228016 669 ntBASIC11.82□□□□□ -0.52
Pcdha3Q91Y16 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Pcdha3Q91Y16 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC11.82□□□□□ -0.52
Pcdha3Q91Y16 Gm5451-201ENSMUST00000080545 579 ntBASIC11.82□□□□□ -0.52
Pcdha3Q91Y16 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdha3Q91Y16 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Pcdha3Q91Y16 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdha3Q91Y16 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdha3Q91Y16 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdha3Q91Y16 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdha3Q91Y16 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdha3Q91Y16 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdha3Q91Y16 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Pcdha3Q91Y16 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdha3Q91Y16 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Pcdha3Q91Y16 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdha3Q91Y16 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdha3Q91Y16 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdha3Q91Y16 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdha3Q91Y16 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdha3Q91Y16 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdha3Q91Y16 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC11.82□□□□□ -0.52
Pcdha3Q91Y16 Gm9387-201ENSMUST00000098624 1320 ntBASIC11.82□□□□□ -0.52
Pcdha3Q91Y16 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC11.82□□□□□ -0.52
Pcdha3Q91Y16 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdha3Q91Y16 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdha3Q91Y16 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdha3Q91Y16 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdha3Q91Y16 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdha3Q91Y16 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdha3Q91Y16 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdha3Q91Y16 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdha3Q91Y16 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Pcdha3Q91Y16 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdha3Q91Y16 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdha3Q91Y16 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdha3Q91Y16 Gm29358-202ENSMUST00000187941 3227 ntBASIC11.81□□□□□ -0.52
Pcdha3Q91Y16 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC11.81□□□□□ -0.52
Pcdha3Q91Y16 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdha3Q91Y16 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Pcdha3Q91Y16 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdha3Q91Y16 Gm29245-201ENSMUST00000187332 1416 ntBASIC11.81□□□□□ -0.52
Pcdha3Q91Y16 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdha3Q91Y16 Gm9466-201ENSMUST00000218144 2246 ntBASIC11.81□□□□□ -0.52
Pcdha3Q91Y16 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdha3Q91Y16 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdha3Q91Y16 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdha3Q91Y16 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdha3Q91Y16 Gm15615-201ENSMUST00000118876 198 ntBASIC11.81□□□□□ -0.52
Pcdha3Q91Y16 Gm12129-201ENSMUST00000120104 1147 ntBASIC11.81□□□□□ -0.52
Pcdha3Q91Y16 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdha3Q91Y16 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdha3Q91Y16 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdha3Q91Y16 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdha3Q91Y16 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC11.81□□□□□ -0.52
Pcdha3Q91Y16 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Pcdha3Q91Y16 Gm3551-201ENSMUST00000190750 664 ntBASIC11.81□□□□□ -0.52
Pcdha3Q91Y16 Gm8574-201ENSMUST00000203207 924 ntBASIC11.81□□□□□ -0.52
Pcdha3Q91Y16 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Pcdha3Q91Y16 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdha3Q91Y16 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC11.81□□□□□ -0.52
Pcdha3Q91Y16 Gm6653-201ENSMUST00000218063 1288 ntBASIC11.81□□□□□ -0.52
Pcdha3Q91Y16 AC124433.1-201ENSMUST00000224483 1063 ntBASIC11.81□□□□□ -0.52
Pcdha3Q91Y16 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Pcdha3Q91Y16 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Pcdha3Q91Y16 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdha3Q91Y16 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Pcdha3Q91Y16 Olfr584-201ENSMUST00000098210 964 ntBASIC11.81□□□□□ -0.52
Pcdha3Q91Y16 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdha3Q91Y16 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdha3Q91Y16 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdha3Q91Y16 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Pcdha3Q91Y16 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdha3Q91Y16 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdha3Q91Y16 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 84.2 ms