Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC10.63□□□□□ -0.71
Clrn1Q8K445 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Clrn1Q8K445 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Clrn1Q8K445 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Clrn1Q8K445 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Clrn1Q8K445 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Clrn1Q8K445 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Clrn1Q8K445 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Clrn1Q8K445 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Clrn1Q8K445 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC10.63□□□□□ -0.71
Clrn1Q8K445 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Clrn1Q8K445 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Clrn1Q8K445 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC10.63□□□□□ -0.71
Clrn1Q8K445 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Clrn1Q8K445 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Clrn1Q8K445 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Clrn1Q8K445 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Clrn1Q8K445 Gm38055-201ENSMUST00000195353 2217 ntBASIC10.62□□□□□ -0.71
Clrn1Q8K445 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Clrn1Q8K445 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Clrn1Q8K445 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Clrn1Q8K445 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Clrn1Q8K445 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Clrn1Q8K445 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Clrn1Q8K445 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Clrn1Q8K445 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Clrn1Q8K445 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Clrn1Q8K445 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Clrn1Q8K445 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Clrn1Q8K445 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Clrn1Q8K445 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC10.62□□□□□ -0.71
Clrn1Q8K445 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Clrn1Q8K445 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC10.62□□□□□ -0.71
Clrn1Q8K445 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Clrn1Q8K445 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Clrn1Q8K445 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC10.62□□□□□ -0.71
Clrn1Q8K445 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Clrn1Q8K445 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Clrn1Q8K445 Gm4294-201ENSMUST00000105169 614 ntBASIC10.62□□□□□ -0.71
Clrn1Q8K445 Gm11949-201ENSMUST00000117640 372 ntBASIC10.62□□□□□ -0.71
Clrn1Q8K445 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC10.62□□□□□ -0.71
Clrn1Q8K445 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC10.62□□□□□ -0.71
Clrn1Q8K445 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC10.62□□□□□ -0.71
Clrn1Q8K445 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Clrn1Q8K445 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Clrn1Q8K445 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC10.62□□□□□ -0.71
Clrn1Q8K445 Gm28196-201ENSMUST00000187719 640 ntBASIC10.62□□□□□ -0.71
Clrn1Q8K445 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC10.62□□□□□ -0.71
Clrn1Q8K445 Gm37284-201ENSMUST00000193607 539 ntBASIC10.62□□□□□ -0.71
Clrn1Q8K445 Gm44315-201ENSMUST00000203041 219 ntBASIC10.62□□□□□ -0.71
Clrn1Q8K445 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Clrn1Q8K445 Gm2594-201ENSMUST00000214774 742 ntBASIC10.62□□□□□ -0.71
Clrn1Q8K445 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC10.62□□□□□ -0.71
Clrn1Q8K445 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Clrn1Q8K445 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Clrn1Q8K445 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Clrn1Q8K445 AC122350.1-201ENSMUST00000228135 533 ntBASIC10.62□□□□□ -0.71
Clrn1Q8K445 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC10.62□□□□□ -0.71
Clrn1Q8K445 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
Clrn1Q8K445 Gm23105-201ENSMUST00000083719 134 ntBASIC10.62□□□□□ -0.71
Clrn1Q8K445 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Clrn1Q8K445 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC10.62□□□□□ -0.71
Clrn1Q8K445 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Clrn1Q8K445 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Clrn1Q8K445 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Clrn1Q8K445 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Clrn1Q8K445 AC153380.1-201ENSMUST00000214959 2364 ntBASIC10.62□□□□□ -0.71
Clrn1Q8K445 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Clrn1Q8K445 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Clrn1Q8K445 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Clrn1Q8K445 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Clrn1Q8K445 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Clrn1Q8K445 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Clrn1Q8K445 AC109214.1-201ENSMUST00000219520 1372 ntBASIC10.62□□□□□ -0.71
Clrn1Q8K445 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Clrn1Q8K445 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Clrn1Q8K445 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Clrn1Q8K445 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Clrn1Q8K445 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Clrn1Q8K445 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Clrn1Q8K445 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Clrn1Q8K445 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Clrn1Q8K445 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC10.61□□□□□ -0.71
Clrn1Q8K445 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Clrn1Q8K445 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Clrn1Q8K445 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Clrn1Q8K445 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Clrn1Q8K445 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Clrn1Q8K445 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Clrn1Q8K445 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Clrn1Q8K445 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC10.61□□□□□ -0.71
Clrn1Q8K445 Gm6560-201ENSMUST00000198588 1591 ntBASIC10.61□□□□□ -0.71
Clrn1Q8K445 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Clrn1Q8K445 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Clrn1Q8K445 Gm5422-201ENSMUST00000050717 2721 ntBASIC10.61□□□□□ -0.71
Clrn1Q8K445 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC10.61□□□□□ -0.71
Clrn1Q8K445 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Clrn1Q8K445 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Clrn1Q8K445 Gm21358-201ENSMUST00000191645 1659 ntBASIC10.61□□□□□ -0.71
Clrn1Q8K445 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms