Protein–RNA interactions for Protein: Q8CE13

Ccdc17, Coiled-coil domain-containing protein 17, mousemouse

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc17Q8CE13 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc17Q8CE13 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.79□□□□□ -0.52
Ccdc17Q8CE13 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.79□□□□□ -0.52
Ccdc17Q8CE13 Gm38140-201ENSMUST00000193617 2755 ntBASIC11.79□□□□□ -0.52
Ccdc17Q8CE13 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc17Q8CE13 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc17Q8CE13 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc17Q8CE13 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc17Q8CE13 Gm44056-201ENSMUST00000204623 1427 ntBASIC11.78□□□□□ -0.52
Ccdc17Q8CE13 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc17Q8CE13 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc17Q8CE13 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc17Q8CE13 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc17Q8CE13 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc17Q8CE13 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc17Q8CE13 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc17Q8CE13 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Ccdc17Q8CE13 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc17Q8CE13 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Ccdc17Q8CE13 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc17Q8CE13 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc17Q8CE13 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc17Q8CE13 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc17Q8CE13 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Ccdc17Q8CE13 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC11.78□□□□□ -0.52
Ccdc17Q8CE13 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc17Q8CE13 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Ccdc17Q8CE13 Gm12179-201ENSMUST00000118344 1272 ntBASIC11.78□□□□□ -0.52
Ccdc17Q8CE13 Gm7541-201ENSMUST00000118361 535 ntBASIC11.78□□□□□ -0.52
Ccdc17Q8CE13 Gm15003-201ENSMUST00000118884 446 ntBASIC11.78□□□□□ -0.52
Ccdc17Q8CE13 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc17Q8CE13 Gm14441-201ENSMUST00000121960 540 ntBASIC11.78□□□□□ -0.52
Ccdc17Q8CE13 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc17Q8CE13 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC11.78□□□□□ -0.52
Ccdc17Q8CE13 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC11.78□□□□□ -0.52
Ccdc17Q8CE13 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC11.78□□□□□ -0.52
Ccdc17Q8CE13 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC11.78□□□□□ -0.52
Ccdc17Q8CE13 Gm7719-201ENSMUST00000182374 975 ntBASIC11.78□□□□□ -0.52
Ccdc17Q8CE13 Gm9192-201ENSMUST00000183221 985 ntBASIC11.78□□□□□ -0.52
Ccdc17Q8CE13 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC11.78□□□□□ -0.52
Ccdc17Q8CE13 Gm9884-201ENSMUST00000194343 1222 ntBASIC11.78□□□□□ -0.52
Ccdc17Q8CE13 Gm43163-201ENSMUST00000196571 442 ntBASIC11.78□□□□□ -0.52
Ccdc17Q8CE13 Gm17825-201ENSMUST00000206836 794 ntBASIC11.78□□□□□ -0.52
Ccdc17Q8CE13 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Ccdc17Q8CE13 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
Ccdc17Q8CE13 Gm8436-201ENSMUST00000210152 1080 ntBASIC11.78□□□□□ -0.52
Ccdc17Q8CE13 Gm5749-201ENSMUST00000210673 1090 ntBASIC11.78□□□□□ -0.52
Ccdc17Q8CE13 Gm6390-201ENSMUST00000215034 589 ntBASIC11.78□□□□□ -0.52
Ccdc17Q8CE13 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC11.78□□□□□ -0.52
Ccdc17Q8CE13 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc17Q8CE13 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc17Q8CE13 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Ccdc17Q8CE13 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc17Q8CE13 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc17Q8CE13 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc17Q8CE13 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc17Q8CE13 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc17Q8CE13 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
Ccdc17Q8CE13 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc17Q8CE13 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc17Q8CE13 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc17Q8CE13 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc17Q8CE13 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc17Q8CE13 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Ccdc17Q8CE13 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC11.78□□□□□ -0.52
Ccdc17Q8CE13 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc17Q8CE13 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
Ccdc17Q8CE13 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc17Q8CE13 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc17Q8CE13 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc17Q8CE13 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc17Q8CE13 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Ccdc17Q8CE13 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc17Q8CE13 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc17Q8CE13 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc17Q8CE13 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ccdc17Q8CE13 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ccdc17Q8CE13 Gm18294-201ENSMUST00000176980 1748 ntBASIC11.77□□□□□ -0.52
Ccdc17Q8CE13 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC11.77□□□□□ -0.52
Ccdc17Q8CE13 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ccdc17Q8CE13 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ccdc17Q8CE13 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ccdc17Q8CE13 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc17Q8CE13 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc17Q8CE13 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc17Q8CE13 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc17Q8CE13 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Ccdc17Q8CE13 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC11.77□□□□□ -0.53
Ccdc17Q8CE13 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Ccdc17Q8CE13 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
Ccdc17Q8CE13 Gm11979-201ENSMUST00000119629 743 ntBASIC11.77□□□□□ -0.53
Ccdc17Q8CE13 Gm15329-201ENSMUST00000121408 155 ntBASIC11.77□□□□□ -0.53
Ccdc17Q8CE13 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc17Q8CE13 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc17Q8CE13 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc17Q8CE13 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc17Q8CE13 Gm6548-201ENSMUST00000167498 1165 ntBASIC11.77□□□□□ -0.53
Ccdc17Q8CE13 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc17Q8CE13 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc17Q8CE13 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms