Protein–RNA interactions for Protein: Q8BU04

Ubr7, Putative E3 ubiquitin-protein ligase UBR7, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr7Q8BU04 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ubr7Q8BU04 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Ubr7Q8BU04 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ubr7Q8BU04 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Ubr7Q8BU04 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ubr7Q8BU04 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Ubr7Q8BU04 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Ubr7Q8BU04 Gm5822-201ENSMUST00000161562 1378 ntBASIC11.4□□□□□ -0.59
Ubr7Q8BU04 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Ubr7Q8BU04 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Ubr7Q8BU04 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ubr7Q8BU04 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ubr7Q8BU04 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ubr7Q8BU04 Prdx6b-201ENSMUST00000057072 2885 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Ubr7Q8BU04 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ubr7Q8BU04 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
Ubr7Q8BU04 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC11.39□□□□□ -0.59
Ubr7Q8BU04 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ubr7Q8BU04 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Ubr7Q8BU04 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Ubr7Q8BU04 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Ubr7Q8BU04 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Ubr7Q8BU04 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC11.39□□□□□ -0.59
Ubr7Q8BU04 Gm6322-201ENSMUST00000118789 1004 ntBASIC11.39□□□□□ -0.59
Ubr7Q8BU04 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC11.39□□□□□ -0.59
Ubr7Q8BU04 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Ubr7Q8BU04 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC11.39□□□□□ -0.59
Ubr7Q8BU04 Gm26848-201ENSMUST00000181052 2467 ntTSL 5 BASIC11.39□□□□□ -0.59
Ubr7Q8BU04 Gm9081-201ENSMUST00000182346 991 ntBASIC11.39□□□□□ -0.59
Ubr7Q8BU04 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ubr7Q8BU04 Gm18776-201ENSMUST00000188833 654 ntBASIC11.39□□□□□ -0.59
Ubr7Q8BU04 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC11.39□□□□□ -0.59
Ubr7Q8BU04 Gm3793-201ENSMUST00000204973 672 ntBASIC11.39□□□□□ -0.59
Ubr7Q8BU04 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC11.39□□□□□ -0.59
Ubr7Q8BU04 Gm18968-201ENSMUST00000221319 862 ntBASIC11.39□□□□□ -0.59
Ubr7Q8BU04 Tex30-201ENSMUST00000027215 1272 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ubr7Q8BU04 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ubr7Q8BU04 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Ubr7Q8BU04 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ubr7Q8BU04 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ubr7Q8BU04 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Ubr7Q8BU04 Gm6831-202ENSMUST00000213025 1673 ntBASIC11.39□□□□□ -0.59
Ubr7Q8BU04 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ubr7Q8BU04 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC11.39□□□□□ -0.59
Ubr7Q8BU04 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Ubr7Q8BU04 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ubr7Q8BU04 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Ubr7Q8BU04 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ubr7Q8BU04 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ubr7Q8BU04 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC11.39□□□□□ -0.59
Ubr7Q8BU04 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ubr7Q8BU04 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ubr7Q8BU04 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ubr7Q8BU04 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
Ubr7Q8BU04 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ubr7Q8BU04 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Ubr7Q8BU04 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC11.38□□□□□ -0.59
Ubr7Q8BU04 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Ubr7Q8BU04 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Ubr7Q8BU04 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.38□□□□□ -0.59
Ubr7Q8BU04 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC11.38□□□□□ -0.59
Ubr7Q8BU04 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ubr7Q8BU04 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ubr7Q8BU04 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ubr7Q8BU04 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Ubr7Q8BU04 Gm5739-201ENSMUST00000208601 1703 ntBASIC11.38□□□□□ -0.59
Ubr7Q8BU04 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ubr7Q8BU04 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Ubr7Q8BU04 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC11.38□□□□□ -0.59
Ubr7Q8BU04 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ubr7Q8BU04 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.38□□□□□ -0.59
Ubr7Q8BU04 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ubr7Q8BU04 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ubr7Q8BU04 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ubr7Q8BU04 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Ubr7Q8BU04 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ubr7Q8BU04 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC11.38□□□□□ -0.59
Ubr7Q8BU04 Snord23-201ENSMUST00000116828 109 ntBASIC11.38□□□□□ -0.59
Ubr7Q8BU04 Gm11422-201ENSMUST00000118925 1103 ntBASIC11.38□□□□□ -0.59
Ubr7Q8BU04 Gm12990-201ENSMUST00000120372 468 ntBASIC11.38□□□□□ -0.59
Ubr7Q8BU04 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC11.38□□□□□ -0.59
Ubr7Q8BU04 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC11.38□□□□□ -0.59
Ubr7Q8BU04 Gm4982-201ENSMUST00000160440 1098 ntBASIC11.38□□□□□ -0.59
Ubr7Q8BU04 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC11.38□□□□□ -0.59
Ubr7Q8BU04 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ubr7Q8BU04 Gm4753-201ENSMUST00000188327 1255 ntBASIC11.38□□□□□ -0.59
Ubr7Q8BU04 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC11.38□□□□□ -0.59
Ubr7Q8BU04 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Ubr7Q8BU04 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC11.38□□□□□ -0.59
Ubr7Q8BU04 Gm42779-201ENSMUST00000198807 406 ntBASIC11.38□□□□□ -0.59
Ubr7Q8BU04 Gm7902-201ENSMUST00000198842 947 ntBASIC11.38□□□□□ -0.59
Ubr7Q8BU04 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC11.38□□□□□ -0.59
Ubr7Q8BU04 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ubr7Q8BU04 Gm7082-201ENSMUST00000209880 969 ntBASIC11.38□□□□□ -0.59
Ubr7Q8BU04 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC11.38□□□□□ -0.59
Ubr7Q8BU04 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Ubr7Q8BU04 Gm25580-201ENSMUST00000083409 327 ntBASIC11.38□□□□□ -0.59
Ubr7Q8BU04 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ubr7Q8BU04 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ubr7Q8BU04 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms