Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC11.68□□□□□ -0.54
Trim62Q80V85 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trim62Q80V85 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trim62Q80V85 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trim62Q80V85 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC11.68□□□□□ -0.54
Trim62Q80V85 Gm18159-201ENSMUST00000174516 1070 ntBASIC11.68□□□□□ -0.54
Trim62Q80V85 Gm4753-201ENSMUST00000188327 1255 ntBASIC11.68□□□□□ -0.54
Trim62Q80V85 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC11.68□□□□□ -0.54
Trim62Q80V85 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trim62Q80V85 Gm8436-201ENSMUST00000210152 1080 ntBASIC11.68□□□□□ -0.54
Trim62Q80V85 Gm5749-201ENSMUST00000210673 1090 ntBASIC11.68□□□□□ -0.54
Trim62Q80V85 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Trim62Q80V85 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim62Q80V85 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim62Q80V85 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim62Q80V85 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim62Q80V85 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim62Q80V85 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trim62Q80V85 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim62Q80V85 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim62Q80V85 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim62Q80V85 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim62Q80V85 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim62Q80V85 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Trim62Q80V85 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim62Q80V85 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim62Q80V85 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim62Q80V85 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim62Q80V85 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Trim62Q80V85 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim62Q80V85 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim62Q80V85 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Trim62Q80V85 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim62Q80V85 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Trim62Q80V85 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trim62Q80V85 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim62Q80V85 Uaca-201ENSMUST00000050183 4428 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim62Q80V85 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim62Q80V85 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Trim62Q80V85 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Trim62Q80V85 Snord17-201ENSMUST00000104526 238 ntBASIC11.67□□□□□ -0.54
Trim62Q80V85 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Trim62Q80V85 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC11.67□□□□□ -0.54
Trim62Q80V85 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
Trim62Q80V85 Gm11892-201ENSMUST00000117711 1202 ntBASIC11.67□□□□□ -0.54
Trim62Q80V85 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC11.67□□□□□ -0.54
Trim62Q80V85 Gm6439-201ENSMUST00000199849 862 ntBASIC11.67□□□□□ -0.54
Trim62Q80V85 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC11.67□□□□□ -0.54
Trim62Q80V85 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC11.67□□□□□ -0.54
Trim62Q80V85 AC102569.1-201ENSMUST00000221563 685 ntBASIC11.67□□□□□ -0.54
Trim62Q80V85 Lgi3-203ENSMUST00000226548 1001 ntBASIC11.67□□□□□ -0.54
Trim62Q80V85 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim62Q80V85 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim62Q80V85 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trim62Q80V85 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim62Q80V85 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trim62Q80V85 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim62Q80V85 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Trim62Q80V85 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Trim62Q80V85 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC11.67□□□□□ -0.54
Trim62Q80V85 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim62Q80V85 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim62Q80V85 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim62Q80V85 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
Trim62Q80V85 AC158636.1-201ENSMUST00000220118 1393 ntBASIC11.67□□□□□ -0.54
Trim62Q80V85 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Trim62Q80V85 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trim62Q80V85 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim62Q80V85 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trim62Q80V85 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim62Q80V85 Gm43931-201ENSMUST00000204817 2870 ntBASIC11.66□□□□□ -0.54
Trim62Q80V85 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim62Q80V85 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Trim62Q80V85 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trim62Q80V85 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trim62Q80V85 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim62Q80V85 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trim62Q80V85 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trim62Q80V85 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim62Q80V85 Gm21136-201ENSMUST00000186812 2575 ntBASIC11.66□□□□□ -0.54
Trim62Q80V85 Gm6605-201ENSMUST00000031488 2574 ntBASIC11.66□□□□□ -0.54
Trim62Q80V85 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim62Q80V85 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC11.66□□□□□ -0.54
Trim62Q80V85 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC11.66□□□□□ -0.54
Trim62Q80V85 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC11.66□□□□□ -0.54
Trim62Q80V85 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim62Q80V85 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC11.66□□□□□ -0.54
Trim62Q80V85 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trim62Q80V85 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trim62Q80V85 Gm24398-201ENSMUST00000157870 109 ntBASIC11.66□□□□□ -0.54
Trim62Q80V85 Gm6407-201ENSMUST00000176468 549 ntBASIC11.66□□□□□ -0.54
Trim62Q80V85 Gm26134-201ENSMUST00000178484 110 ntBASIC11.66□□□□□ -0.54
Trim62Q80V85 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC11.66□□□□□ -0.54
Trim62Q80V85 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trim62Q80V85 Gm43667-201ENSMUST00000198616 1095 ntBASIC11.66□□□□□ -0.54
Trim62Q80V85 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trim62Q80V85 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trim62Q80V85 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC11.66□□□□□ -0.54
Trim62Q80V85 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC11.66□□□□□ -0.54
Trim62Q80V85 AC114645.1-201ENSMUST00000215831 187 ntBASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms