Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Prpf38bQ80SY5 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Prpf38bQ80SY5 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Prpf38bQ80SY5 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Prpf38bQ80SY5 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Prpf38bQ80SY5 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Prpf38bQ80SY5 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Prpf38bQ80SY5 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Prpf38bQ80SY5 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Prpf38bQ80SY5 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Prpf38bQ80SY5 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Prpf38bQ80SY5 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.96□□□□□ -0.49
Prpf38bQ80SY5 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Prpf38bQ80SY5 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Prpf38bQ80SY5 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Prpf38bQ80SY5 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Prpf38bQ80SY5 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Prpf38bQ80SY5 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Prpf38bQ80SY5 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Prpf38bQ80SY5 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Prpf38bQ80SY5 1700011M02Rik-201ENSMUST00000113602 420 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Prpf38bQ80SY5 Gm14892-201ENSMUST00000117636 267 ntBASIC11.96□□□□□ -0.49
Prpf38bQ80SY5 Gm12453-201ENSMUST00000121981 331 ntBASIC11.96□□□□□ -0.49
Prpf38bQ80SY5 Gm13954-201ENSMUST00000123441 543 ntTSL 3 BASIC11.96□□□□□ -0.49
Prpf38bQ80SY5 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC11.96□□□□□ -0.49
Prpf38bQ80SY5 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC11.96□□□□□ -0.49
Prpf38bQ80SY5 Gm8723-201ENSMUST00000166076 820 ntBASIC11.96□□□□□ -0.49
Prpf38bQ80SY5 Gm8701-201ENSMUST00000169259 874 ntBASIC11.96□□□□□ -0.49
Prpf38bQ80SY5 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC11.96□□□□□ -0.49
Prpf38bQ80SY5 Gm42599-201ENSMUST00000201308 469 ntBASIC11.96□□□□□ -0.49
Prpf38bQ80SY5 Gm8956-201ENSMUST00000203939 825 ntBASIC11.96□□□□□ -0.49
Prpf38bQ80SY5 Gm6423-201ENSMUST00000204315 934 ntBASIC11.96□□□□□ -0.49
Prpf38bQ80SY5 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Prpf38bQ80SY5 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC11.96□□□□□ -0.49
Prpf38bQ80SY5 Abracl-203ENSMUST00000218994 425 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Prpf38bQ80SY5 CT572999.1-201ENSMUST00000220315 1260 ntBASIC11.96□□□□□ -0.49
Prpf38bQ80SY5 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC11.96□□□□□ -0.49
Prpf38bQ80SY5 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Prpf38bQ80SY5 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Prpf38bQ80SY5 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Prpf38bQ80SY5 Gm42141-201ENSMUST00000196534 2172 ntBASIC11.96□□□□□ -0.5
Prpf38bQ80SY5 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Prpf38bQ80SY5 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Prpf38bQ80SY5 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Prpf38bQ80SY5 AC137950.2-202ENSMUST00000227150 1635 ntBASIC11.96□□□□□ -0.5
Prpf38bQ80SY5 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Prpf38bQ80SY5 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Prpf38bQ80SY5 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.96□□□□□ -0.5
Prpf38bQ80SY5 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Prpf38bQ80SY5 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Prpf38bQ80SY5 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Prpf38bQ80SY5 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Prpf38bQ80SY5 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC11.95□□□□□ -0.5
Prpf38bQ80SY5 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Prpf38bQ80SY5 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Prpf38bQ80SY5 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Prpf38bQ80SY5 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Prpf38bQ80SY5 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Prpf38bQ80SY5 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.95□□□□□ -0.5
Prpf38bQ80SY5 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Prpf38bQ80SY5 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC11.95□□□□□ -0.5
Prpf38bQ80SY5 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Prpf38bQ80SY5 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.95□□□□□ -0.5
Prpf38bQ80SY5 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Prpf38bQ80SY5 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.95□□□□□ -0.5
Prpf38bQ80SY5 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Prpf38bQ80SY5 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Prpf38bQ80SY5 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
Prpf38bQ80SY5 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Prpf38bQ80SY5 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.95□□□□□ -0.5
Prpf38bQ80SY5 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Prpf38bQ80SY5 AC154314.2-201ENSMUST00000223677 3502 ntBASIC11.95□□□□□ -0.5
Prpf38bQ80SY5 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Prpf38bQ80SY5 Gm23255-201ENSMUST00000102244 110 ntBASIC11.95□□□□□ -0.5
Prpf38bQ80SY5 Ighv7-1-201ENSMUST00000103474 363 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Prpf38bQ80SY5 Gm25053-201ENSMUST00000103982 133 ntBASIC11.95□□□□□ -0.5
Prpf38bQ80SY5 Gm25922-201ENSMUST00000104281 130 ntBASIC11.95□□□□□ -0.5
Prpf38bQ80SY5 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Prpf38bQ80SY5 Gm11560-201ENSMUST00000117567 948 ntBASIC11.95□□□□□ -0.5
Prpf38bQ80SY5 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC11.95□□□□□ -0.5
Prpf38bQ80SY5 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Prpf38bQ80SY5 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC11.95□□□□□ -0.5
Prpf38bQ80SY5 Gm24679-201ENSMUST00000158762 111 ntBASIC11.95□□□□□ -0.5
Prpf38bQ80SY5 Gm28941-201ENSMUST00000185536 1017 ntBASIC11.95□□□□□ -0.5
Prpf38bQ80SY5 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Prpf38bQ80SY5 Gm19587-201ENSMUST00000191395 545 ntBASIC11.95□□□□□ -0.5
Prpf38bQ80SY5 Gm25053-202ENSMUST00000199731 132 ntBASIC11.95□□□□□ -0.5
Prpf38bQ80SY5 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Prpf38bQ80SY5 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Prpf38bQ80SY5 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC11.95□□□□□ -0.5
Prpf38bQ80SY5 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC11.95□□□□□ -0.5
Prpf38bQ80SY5 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC11.95□□□□□ -0.5
Prpf38bQ80SY5 Gm18514-201ENSMUST00000218980 436 ntBASIC11.95□□□□□ -0.5
Prpf38bQ80SY5 AC130477.1-201ENSMUST00000226982 420 ntBASIC11.95□□□□□ -0.5
Prpf38bQ80SY5 AC142266.1-201ENSMUST00000228107 415 ntBASIC11.95□□□□□ -0.5
Prpf38bQ80SY5 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Prpf38bQ80SY5 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Prpf38bQ80SY5 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Prpf38bQ80SY5 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Prpf38bQ80SY5 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms