Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh8Q7TSK3 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh8Q7TSK3 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh8Q7TSK3 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh8Q7TSK3 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Pcdh8Q7TSK3 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC11.15□□□□□ -0.62
Pcdh8Q7TSK3 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh8Q7TSK3 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Pcdh8Q7TSK3 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh8Q7TSK3 Gm37931-201ENSMUST00000194686 2866 ntBASIC11.15□□□□□ -0.62
Pcdh8Q7TSK3 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh8Q7TSK3 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC11.15□□□□□ -0.62
Pcdh8Q7TSK3 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh8Q7TSK3 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh8Q7TSK3 Gm5740-201ENSMUST00000211003 1857 ntBASIC11.15□□□□□ -0.62
Pcdh8Q7TSK3 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh8Q7TSK3 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh8Q7TSK3 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh8Q7TSK3 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Pcdh8Q7TSK3 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh8Q7TSK3 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh8Q7TSK3 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh8Q7TSK3 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh8Q7TSK3 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh8Q7TSK3 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC11.15□□□□□ -0.62
Pcdh8Q7TSK3 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Pcdh8Q7TSK3 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Pcdh8Q7TSK3 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC11.15□□□□□ -0.62
Pcdh8Q7TSK3 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh8Q7TSK3 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC11.15□□□□□ -0.62
Pcdh8Q7TSK3 Gm16219-201ENSMUST00000120096 274 ntBASIC11.15□□□□□ -0.62
Pcdh8Q7TSK3 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Pcdh8Q7TSK3 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC11.15□□□□□ -0.62
Pcdh8Q7TSK3 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh8Q7TSK3 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Pcdh8Q7TSK3 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC11.15□□□□□ -0.62
Pcdh8Q7TSK3 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC11.15□□□□□ -0.62
Pcdh8Q7TSK3 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC11.15□□□□□ -0.62
Pcdh8Q7TSK3 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC11.15□□□□□ -0.62
Pcdh8Q7TSK3 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC11.15□□□□□ -0.62
Pcdh8Q7TSK3 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Pcdh8Q7TSK3 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Pcdh8Q7TSK3 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Pcdh8Q7TSK3 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh8Q7TSK3 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh8Q7TSK3 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Pcdh8Q7TSK3 Gm3765-201ENSMUST00000130985 1447 ntBASIC11.15□□□□□ -0.62
Pcdh8Q7TSK3 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh8Q7TSK3 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh8Q7TSK3 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC11.15□□□□□ -0.62
Pcdh8Q7TSK3 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Pcdh8Q7TSK3 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC11.15□□□□□ -0.62
Pcdh8Q7TSK3 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.63
Pcdh8Q7TSK3 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Pcdh8Q7TSK3 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Pcdh8Q7TSK3 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Pcdh8Q7TSK3 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.63
Pcdh8Q7TSK3 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Pcdh8Q7TSK3 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh8Q7TSK3 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Pcdh8Q7TSK3 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh8Q7TSK3 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh8Q7TSK3 Gm45677-201ENSMUST00000209975 1341 ntBASIC11.14□□□□□ -0.63
Pcdh8Q7TSK3 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh8Q7TSK3 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Pcdh8Q7TSK3 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh8Q7TSK3 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh8Q7TSK3 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh8Q7TSK3 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh8Q7TSK3 Gm15991-202ENSMUST00000212123 3565 ntBASIC11.14□□□□□ -0.63
Pcdh8Q7TSK3 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh8Q7TSK3 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh8Q7TSK3 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh8Q7TSK3 Gm4294-201ENSMUST00000105169 614 ntBASIC11.14□□□□□ -0.63
Pcdh8Q7TSK3 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh8Q7TSK3 Gm14807-201ENSMUST00000116640 983 ntBASIC11.14□□□□□ -0.63
Pcdh8Q7TSK3 Gm4993-201ENSMUST00000118719 1174 ntBASIC11.14□□□□□ -0.63
Pcdh8Q7TSK3 Gm14219-201ENSMUST00000120414 288 ntBASIC11.14□□□□□ -0.63
Pcdh8Q7TSK3 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh8Q7TSK3 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC11.14□□□□□ -0.63
Pcdh8Q7TSK3 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC11.14□□□□□ -0.63
Pcdh8Q7TSK3 Gm22877-201ENSMUST00000175451 105 ntBASIC11.14□□□□□ -0.63
Pcdh8Q7TSK3 Gm6407-201ENSMUST00000176468 549 ntBASIC11.14□□□□□ -0.63
Pcdh8Q7TSK3 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC11.14□□□□□ -0.63
Pcdh8Q7TSK3 Mir7051-201ENSMUST00000184167 73 ntBASIC11.14□□□□□ -0.63
Pcdh8Q7TSK3 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC11.14□□□□□ -0.63
Pcdh8Q7TSK3 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC11.14□□□□□ -0.63
Pcdh8Q7TSK3 Gm6722-201ENSMUST00000221586 390 ntBASIC11.14□□□□□ -0.63
Pcdh8Q7TSK3 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh8Q7TSK3 Gm10263-201ENSMUST00000085163 300 ntBASIC11.14□□□□□ -0.63
Pcdh8Q7TSK3 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh8Q7TSK3 Gm44190-201ENSMUST00000205083 1401 ntBASIC11.14□□□□□ -0.63
Pcdh8Q7TSK3 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh8Q7TSK3 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh8Q7TSK3 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh8Q7TSK3 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC11.14□□□□□ -0.63
Pcdh8Q7TSK3 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh8Q7TSK3 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh8Q7TSK3 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh8Q7TSK3 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms