Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Snrnp40Q6PE01 Gm9244-201ENSMUST00000056767 2129 ntBASIC9.95□□□□□ -0.82
Snrnp40Q6PE01 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC9.95□□□□□ -0.82
Snrnp40Q6PE01 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Snrnp40Q6PE01 Gm20554-201ENSMUST00000177421 2352 ntBASIC9.95□□□□□ -0.82
Snrnp40Q6PE01 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Snrnp40Q6PE01 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Snrnp40Q6PE01 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC9.95□□□□□ -0.82
Snrnp40Q6PE01 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Snrnp40Q6PE01 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Snrnp40Q6PE01 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Snrnp40Q6PE01 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Snrnp40Q6PE01 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Snrnp40Q6PE01 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Snrnp40Q6PE01 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Snrnp40Q6PE01 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Snrnp40Q6PE01 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Snrnp40Q6PE01 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Snrnp40Q6PE01 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Snrnp40Q6PE01 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Snrnp40Q6PE01 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC9.94□□□□□ -0.82
Snrnp40Q6PE01 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Snrnp40Q6PE01 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Snrnp40Q6PE01 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Snrnp40Q6PE01 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Snrnp40Q6PE01 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Snrnp40Q6PE01 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Snrnp40Q6PE01 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC9.94□□□□□ -0.82
Snrnp40Q6PE01 Gm37122-201ENSMUST00000195313 1567 ntBASIC9.94□□□□□ -0.82
Snrnp40Q6PE01 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Snrnp40Q6PE01 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Snrnp40Q6PE01 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC9.94□□□□□ -0.82
Snrnp40Q6PE01 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Snrnp40Q6PE01 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Snrnp40Q6PE01 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC9.94□□□□□ -0.82
Snrnp40Q6PE01 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC9.94□□□□□ -0.82
Snrnp40Q6PE01 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Snrnp40Q6PE01 Gm12418-201ENSMUST00000118116 942 ntBASIC9.94□□□□□ -0.82
Snrnp40Q6PE01 Gm6758-201ENSMUST00000119643 1055 ntBASIC9.94□□□□□ -0.82
Snrnp40Q6PE01 Gm9166-201ENSMUST00000120293 561 ntBASIC9.94□□□□□ -0.82
Snrnp40Q6PE01 Gm4917-201ENSMUST00000121452 650 ntBASIC9.94□□□□□ -0.82
Snrnp40Q6PE01 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Snrnp40Q6PE01 Gm13827-201ENSMUST00000148801 372 ntBASIC9.94□□□□□ -0.82
Snrnp40Q6PE01 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC9.94□□□□□ -0.82
Snrnp40Q6PE01 Gm16165-201ENSMUST00000160140 795 ntBASIC9.94□□□□□ -0.82
Snrnp40Q6PE01 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Snrnp40Q6PE01 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC9.94□□□□□ -0.82
Snrnp40Q6PE01 Gm23647-201ENSMUST00000175042 109 ntBASIC9.94□□□□□ -0.82
Snrnp40Q6PE01 Rn5s-201ENSMUST00000177555 119 ntBASIC9.94□□□□□ -0.82
Snrnp40Q6PE01 n-R5s108-201ENSMUST00000177575 119 ntBASIC9.94□□□□□ -0.82
Snrnp40Q6PE01 n-R5s121-201ENSMUST00000177589 119 ntBASIC9.94□□□□□ -0.82
Snrnp40Q6PE01 n-R5s146-201ENSMUST00000177889 119 ntBASIC9.94□□□□□ -0.82
Snrnp40Q6PE01 Gm22109-201ENSMUST00000177995 119 ntBASIC9.94□□□□□ -0.82
Snrnp40Q6PE01 Gm22291-201ENSMUST00000178027 119 ntBASIC9.94□□□□□ -0.82
Snrnp40Q6PE01 n-R5s141-201ENSMUST00000178066 119 ntBASIC9.94□□□□□ -0.82
Snrnp40Q6PE01 Gm23284-201ENSMUST00000178069 119 ntBASIC9.94□□□□□ -0.82
Snrnp40Q6PE01 n-R5s100-201ENSMUST00000178106 119 ntBASIC9.94□□□□□ -0.82
Snrnp40Q6PE01 n-R5s111-201ENSMUST00000178203 119 ntBASIC9.94□□□□□ -0.82
Snrnp40Q6PE01 n-R5s105-201ENSMUST00000178499 119 ntBASIC9.94□□□□□ -0.82
Snrnp40Q6PE01 n-R5s149-201ENSMUST00000178520 119 ntBASIC9.94□□□□□ -0.82
Snrnp40Q6PE01 n-R5s103-201ENSMUST00000178755 119 ntBASIC9.94□□□□□ -0.82
Snrnp40Q6PE01 n-R5s123-201ENSMUST00000178804 119 ntBASIC9.94□□□□□ -0.82
Snrnp40Q6PE01 n-R5s142-201ENSMUST00000178820 119 ntBASIC9.94□□□□□ -0.82
Snrnp40Q6PE01 n-R5s144-201ENSMUST00000178859 119 ntBASIC9.94□□□□□ -0.82
Snrnp40Q6PE01 n-R5s139-201ENSMUST00000178975 119 ntBASIC9.94□□□□□ -0.82
Snrnp40Q6PE01 n-R5s134-201ENSMUST00000178983 119 ntBASIC9.94□□□□□ -0.82
Snrnp40Q6PE01 n-R5s136-201ENSMUST00000179080 119 ntBASIC9.94□□□□□ -0.82
Snrnp40Q6PE01 Gm25018-201ENSMUST00000179081 119 ntBASIC9.94□□□□□ -0.82
Snrnp40Q6PE01 n-R5s104-201ENSMUST00000179107 119 ntBASIC9.94□□□□□ -0.82
Snrnp40Q6PE01 n-R5s113-201ENSMUST00000179143 119 ntBASIC9.94□□□□□ -0.82
Snrnp40Q6PE01 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC9.94□□□□□ -0.82
Snrnp40Q6PE01 n-R5s133-201ENSMUST00000179275 119 ntBASIC9.94□□□□□ -0.82
Snrnp40Q6PE01 n-R5s117-201ENSMUST00000179431 119 ntBASIC9.94□□□□□ -0.82
Snrnp40Q6PE01 Gm25212-201ENSMUST00000179432 119 ntBASIC9.94□□□□□ -0.82
Snrnp40Q6PE01 n-R5s138-201ENSMUST00000179476 119 ntBASIC9.94□□□□□ -0.82
Snrnp40Q6PE01 n-R5s122-201ENSMUST00000179500 119 ntBASIC9.94□□□□□ -0.82
Snrnp40Q6PE01 n-R5s143-201ENSMUST00000179542 119 ntBASIC9.94□□□□□ -0.82
Snrnp40Q6PE01 n-R5s107-201ENSMUST00000179704 119 ntBASIC9.94□□□□□ -0.82
Snrnp40Q6PE01 Mir133a-1hg-201ENSMUST00000179771 395 ntTSL 3 BASIC9.94□□□□□ -0.82
Snrnp40Q6PE01 Gm26391-201ENSMUST00000179843 119 ntBASIC9.94□□□□□ -0.82
Snrnp40Q6PE01 n-R5s110-201ENSMUST00000179995 119 ntBASIC9.94□□□□□ -0.82
Snrnp40Q6PE01 n-R5s128-201ENSMUST00000180096 119 ntBASIC9.94□□□□□ -0.82
Snrnp40Q6PE01 n-R5s124-201ENSMUST00000180334 119 ntBASIC9.94□□□□□ -0.82
Snrnp40Q6PE01 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC9.94□□□□□ -0.82
Snrnp40Q6PE01 Gm43244-201ENSMUST00000196994 1285 ntBASIC9.94□□□□□ -0.82
Snrnp40Q6PE01 Gm8234-201ENSMUST00000198523 1107 ntBASIC9.94□□□□□ -0.82
Snrnp40Q6PE01 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Snrnp40Q6PE01 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC9.94□□□□□ -0.82
Snrnp40Q6PE01 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC9.94□□□□□ -0.82
Snrnp40Q6PE01 Gm18010-201ENSMUST00000203553 202 ntBASIC9.94□□□□□ -0.82
Snrnp40Q6PE01 Gm7238-201ENSMUST00000206467 973 ntBASIC9.94□□□□□ -0.82
Snrnp40Q6PE01 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Snrnp40Q6PE01 Gm6331-201ENSMUST00000217890 450 ntBASIC9.94□□□□□ -0.82
Snrnp40Q6PE01 AC134601.2-201ENSMUST00000221071 130 ntBASIC9.94□□□□□ -0.82
Snrnp40Q6PE01 Timm9-210ENSMUST00000221892 734 ntTSL 5 BASIC9.94□□□□□ -0.82
Snrnp40Q6PE01 AC154407.1-201ENSMUST00000226777 526 ntBASIC9.94□□□□□ -0.82
Snrnp40Q6PE01 AC154589.2-201ENSMUST00000228847 251 ntBASIC9.94□□□□□ -0.82
Snrnp40Q6PE01 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Snrnp40Q6PE01 Gm24089-201ENSMUST00000093696 109 ntBASIC9.94□□□□□ -0.82
Snrnp40Q6PE01 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms