Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
ClpbQ60649 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC10.85□□□□□ -0.67
ClpbQ60649 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC10.85□□□□□ -0.67
ClpbQ60649 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC10.85□□□□□ -0.67
ClpbQ60649 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
ClpbQ60649 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
ClpbQ60649 Gm14071-201ENSMUST00000117817 509 ntBASIC10.85□□□□□ -0.67
ClpbQ60649 Gm15725-201ENSMUST00000119947 1090 ntBASIC10.85□□□□□ -0.67
ClpbQ60649 Gm12029-201ENSMUST00000120073 832 ntBASIC10.85□□□□□ -0.67
ClpbQ60649 Gm7150-201ENSMUST00000122032 981 ntBASIC10.85□□□□□ -0.67
ClpbQ60649 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC10.85□□□□□ -0.67
ClpbQ60649 Gm10807-201ENSMUST00000177134 795 ntBASIC10.85□□□□□ -0.67
ClpbQ60649 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC10.85□□□□□ -0.67
ClpbQ60649 Ighv5-11-201ENSMUST00000193354 371 ntBASIC10.85□□□□□ -0.67
ClpbQ60649 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC10.85□□□□□ -0.67
ClpbQ60649 Gm43186-201ENSMUST00000198130 824 ntBASIC10.85□□□□□ -0.67
ClpbQ60649 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
ClpbQ60649 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC10.85□□□□□ -0.67
ClpbQ60649 Gm45550-201ENSMUST00000209380 946 ntBASIC10.85□□□□□ -0.67
ClpbQ60649 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
ClpbQ60649 AC166992.1-201ENSMUST00000216356 565 ntBASIC10.85□□□□□ -0.67
ClpbQ60649 AC122876.1-201ENSMUST00000217619 825 ntBASIC10.85□□□□□ -0.67
ClpbQ60649 Gm4797-201ENSMUST00000219075 1283 ntBASIC10.85□□□□□ -0.67
ClpbQ60649 AC122350.1-201ENSMUST00000228135 533 ntBASIC10.85□□□□□ -0.67
ClpbQ60649 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
ClpbQ60649 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
ClpbQ60649 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
ClpbQ60649 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
ClpbQ60649 AC153506.1-201ENSMUST00000218768 2915 ntBASIC10.85□□□□□ -0.67
ClpbQ60649 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC10.85□□□□□ -0.67
ClpbQ60649 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC10.85□□□□□ -0.67
ClpbQ60649 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
ClpbQ60649 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
ClpbQ60649 Adgrv1-214ENSMUST00000224088 1492 ntBASIC10.85□□□□□ -0.67
ClpbQ60649 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC10.85□□□□□ -0.67
ClpbQ60649 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
ClpbQ60649 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
ClpbQ60649 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
ClpbQ60649 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
ClpbQ60649 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
ClpbQ60649 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
ClpbQ60649 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
ClpbQ60649 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
ClpbQ60649 Gm5124-202ENSMUST00000132683 2083 ntBASIC10.85□□□□□ -0.67
ClpbQ60649 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
ClpbQ60649 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
ClpbQ60649 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
ClpbQ60649 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
ClpbQ60649 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC10.84□□□□□ -0.67
ClpbQ60649 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC10.84□□□□□ -0.67
ClpbQ60649 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
ClpbQ60649 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC10.84□□□□□ -0.67
ClpbQ60649 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
ClpbQ60649 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
ClpbQ60649 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
ClpbQ60649 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
ClpbQ60649 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
ClpbQ60649 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
ClpbQ60649 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
ClpbQ60649 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
ClpbQ60649 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
ClpbQ60649 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
ClpbQ60649 Gm14585-201ENSMUST00000120713 634 ntBASIC10.84□□□□□ -0.67
ClpbQ60649 Gm11246-201ENSMUST00000120880 345 ntBASIC10.84□□□□□ -0.67
ClpbQ60649 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
ClpbQ60649 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC10.84□□□□□ -0.67
ClpbQ60649 Gm3329-201ENSMUST00000159873 556 ntBASIC10.84□□□□□ -0.67
ClpbQ60649 Gm4654-201ENSMUST00000183305 982 ntBASIC10.84□□□□□ -0.67
ClpbQ60649 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
ClpbQ60649 Gm29164-201ENSMUST00000185454 1024 ntBASIC10.84□□□□□ -0.67
ClpbQ60649 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC10.84□□□□□ -0.67
ClpbQ60649 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC10.84□□□□□ -0.67
ClpbQ60649 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC10.84□□□□□ -0.67
ClpbQ60649 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC10.84□□□□□ -0.67
ClpbQ60649 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC10.84□□□□□ -0.67
ClpbQ60649 Gm5051-201ENSMUST00000204085 485 ntBASIC10.84□□□□□ -0.67
ClpbQ60649 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC10.84□□□□□ -0.67
ClpbQ60649 Gm2517-201ENSMUST00000215651 348 ntBASIC10.84□□□□□ -0.67
ClpbQ60649 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC10.84□□□□□ -0.67
ClpbQ60649 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
ClpbQ60649 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
ClpbQ60649 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
ClpbQ60649 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
ClpbQ60649 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC10.84□□□□□ -0.67
ClpbQ60649 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
ClpbQ60649 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
ClpbQ60649 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC10.84□□□□□ -0.67
ClpbQ60649 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
ClpbQ60649 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
ClpbQ60649 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
ClpbQ60649 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
ClpbQ60649 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
ClpbQ60649 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
ClpbQ60649 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
ClpbQ60649 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
ClpbQ60649 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
ClpbQ60649 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
ClpbQ60649 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
ClpbQ60649 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
ClpbQ60649 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms