Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Vps54Q5SPW0 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps54Q5SPW0 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC13.51□□□□□ -0.25
Vps54Q5SPW0 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps54Q5SPW0 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps54Q5SPW0 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps54Q5SPW0 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps54Q5SPW0 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Vps54Q5SPW0 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps54Q5SPW0 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps54Q5SPW0 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Vps54Q5SPW0 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Vps54Q5SPW0 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps54Q5SPW0 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Vps54Q5SPW0 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps54Q5SPW0 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC13.5□□□□□ -0.25
Vps54Q5SPW0 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps54Q5SPW0 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps54Q5SPW0 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps54Q5SPW0 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Vps54Q5SPW0 Rgr-203ENSMUST00000225070 4704 ntBASIC13.5□□□□□ -0.25
Vps54Q5SPW0 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Vps54Q5SPW0 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps54Q5SPW0 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC13.5□□□□□ -0.25
Vps54Q5SPW0 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps54Q5SPW0 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Vps54Q5SPW0 Gm12030-201ENSMUST00000121917 223 ntBASIC13.5□□□□□ -0.25
Vps54Q5SPW0 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC13.5□□□□□ -0.25
Vps54Q5SPW0 Gm25343-201ENSMUST00000157460 107 ntBASIC13.5□□□□□ -0.25
Vps54Q5SPW0 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Vps54Q5SPW0 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC13.5□□□□□ -0.25
Vps54Q5SPW0 Gm4895-201ENSMUST00000181646 1137 ntBASIC13.5□□□□□ -0.25
Vps54Q5SPW0 Gm9358-201ENSMUST00000183067 927 ntBASIC13.5□□□□□ -0.25
Vps54Q5SPW0 CT025678.1-201ENSMUST00000214795 2972 ntBASIC13.5□□□□□ -0.25
Vps54Q5SPW0 Gm9139-201ENSMUST00000218817 700 ntBASIC13.5□□□□□ -0.25
Vps54Q5SPW0 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC13.5□□□□□ -0.25
Vps54Q5SPW0 Gm4811-201ENSMUST00000220879 1220 ntBASIC13.5□□□□□ -0.25
Vps54Q5SPW0 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps54Q5SPW0 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps54Q5SPW0 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps54Q5SPW0 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps54Q5SPW0 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps54Q5SPW0 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Vps54Q5SPW0 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps54Q5SPW0 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Vps54Q5SPW0 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps54Q5SPW0 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Vps54Q5SPW0 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps54Q5SPW0 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Vps54Q5SPW0 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Vps54Q5SPW0 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Vps54Q5SPW0 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps54Q5SPW0 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps54Q5SPW0 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps54Q5SPW0 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Vps54Q5SPW0 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps54Q5SPW0 Gm6560-201ENSMUST00000198588 1591 ntBASIC13.49□□□□□ -0.25
Vps54Q5SPW0 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Vps54Q5SPW0 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Vps54Q5SPW0 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Vps54Q5SPW0 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Vps54Q5SPW0 Gm2128-201ENSMUST00000108009 2560 ntBASIC13.49□□□□□ -0.25
Vps54Q5SPW0 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Vps54Q5SPW0 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vps54Q5SPW0 Gm5308-201ENSMUST00000196752 1354 ntBASIC13.49□□□□□ -0.25
Vps54Q5SPW0 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Vps54Q5SPW0 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vps54Q5SPW0 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Vps54Q5SPW0 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Vps54Q5SPW0 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC13.49□□□□□ -0.25
Vps54Q5SPW0 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Vps54Q5SPW0 Gm26134-201ENSMUST00000178484 110 ntBASIC13.49□□□□□ -0.25
Vps54Q5SPW0 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Vps54Q5SPW0 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Vps54Q5SPW0 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC13.49□□□□□ -0.25
Vps54Q5SPW0 Gm9369-201ENSMUST00000196009 733 ntBASIC13.49□□□□□ -0.25
Vps54Q5SPW0 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC13.49□□□□□ -0.25
Vps54Q5SPW0 AC165154.1-201ENSMUST00000226661 340 ntBASIC13.49□□□□□ -0.25
Vps54Q5SPW0 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vps54Q5SPW0 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Vps54Q5SPW0 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Vps54Q5SPW0 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Vps54Q5SPW0 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vps54Q5SPW0 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC13.49□□□□□ -0.25
Vps54Q5SPW0 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Vps54Q5SPW0 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vps54Q5SPW0 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Vps54Q5SPW0 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Vps54Q5SPW0 Gm6024-201ENSMUST00000117850 1558 ntBASIC13.49□□□□□ -0.25
Vps54Q5SPW0 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vps54Q5SPW0 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vps54Q5SPW0 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vps54Q5SPW0 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Vps54Q5SPW0 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Vps54Q5SPW0 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Vps54Q5SPW0 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vps54Q5SPW0 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vps54Q5SPW0 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vps54Q5SPW0 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vps54Q5SPW0 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms