Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Vps13aQ5H8C4 Gm25735-201ENSMUST00000175164 215 ntBASIC10.83□□□□□ -0.68
Vps13aQ5H8C4 Gm3115-202ENSMUST00000177660 618 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Vps13aQ5H8C4 Gm6337-203ENSMUST00000177662 618 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Vps13aQ5H8C4 Gm3727-202ENSMUST00000178251 618 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Vps13aQ5H8C4 Gm26750-201ENSMUST00000181718 711 ntTSL 5 BASIC10.83□□□□□ -0.68
Vps13aQ5H8C4 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Vps13aQ5H8C4 Gm6342-201ENSMUST00000204344 766 ntBASIC10.83□□□□□ -0.68
Vps13aQ5H8C4 Zkscan7-205ENSMUST00000216462 990 ntBASIC10.83□□□□□ -0.68
Vps13aQ5H8C4 AC156561.1-201ENSMUST00000224774 233 ntBASIC10.83□□□□□ -0.68
Vps13aQ5H8C4 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Vps13aQ5H8C4 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Vps13aQ5H8C4 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Vps13aQ5H8C4 Gm45663-201ENSMUST00000210429 1632 ntBASIC10.83□□□□□ -0.68
Vps13aQ5H8C4 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC10.83□□□□□ -0.68
Vps13aQ5H8C4 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Vps13aQ5H8C4 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Vps13aQ5H8C4 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Vps13aQ5H8C4 Snord17-201ENSMUST00000104526 238 ntBASIC10.83□□□□□ -0.68
Vps13aQ5H8C4 Gm11569-201ENSMUST00000105057 869 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Vps13aQ5H8C4 Gm13547-202ENSMUST00000113810 629 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Vps13aQ5H8C4 Ighv6-4-201ENSMUST00000177949 297 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Vps13aQ5H8C4 Gm7539-201ENSMUST00000189789 630 ntBASIC10.83□□□□□ -0.68
Vps13aQ5H8C4 1700063D05Rik-203ENSMUST00000191461 666 ntTSL 2 BASIC10.83□□□□□ -0.68
Vps13aQ5H8C4 1500002F19Rik-203ENSMUST00000211184 375 ntTSL 3 BASIC10.83□□□□□ -0.68
Vps13aQ5H8C4 AC140381.2-201ENSMUST00000217935 1260 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Vps13aQ5H8C4 AC122356.2-201ENSMUST00000226962 820 ntBASIC10.83□□□□□ -0.68
Vps13aQ5H8C4 Cxcr1-201ENSMUST00000053389 1125 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Vps13aQ5H8C4 Eif3k-201ENSMUST00000066070 774 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Vps13aQ5H8C4 Olfr1535-201ENSMUST00000068163 981 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Vps13aQ5H8C4 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Vps13aQ5H8C4 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Vps13aQ5H8C4 Prkd3-204ENSMUST00000119284 4743 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Vps13aQ5H8C4 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Vps13aQ5H8C4 AC147366.2-201ENSMUST00000226859 2038 ntBASIC10.83□□□□□ -0.68
Vps13aQ5H8C4 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Vps13aQ5H8C4 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Vps13aQ5H8C4 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Vps13aQ5H8C4 Hsd3b1-202ENSMUST00000107016 1855 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Vps13aQ5H8C4 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Vps13aQ5H8C4 Pabpc5-202ENSMUST00000113366 2243 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Vps13aQ5H8C4 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Vps13aQ5H8C4 Gm16439-201ENSMUST00000100687 564 ntBASIC10.83□□□□□ -0.68
Vps13aQ5H8C4 Gm11380-201ENSMUST00000118067 560 ntBASIC10.83□□□□□ -0.68
Vps13aQ5H8C4 Gast-201ENSMUST00000017309 460 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Vps13aQ5H8C4 A630023A22Rik-201ENSMUST00000178958 1277 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Vps13aQ5H8C4 Gm6098-201ENSMUST00000180234 330 ntBASIC10.83□□□□□ -0.68
Vps13aQ5H8C4 Gm27200-201ENSMUST00000184626 657 ntTSL 3 BASIC10.83□□□□□ -0.68
Vps13aQ5H8C4 Gm3116-201ENSMUST00000189440 1116 ntBASIC10.83□□□□□ -0.68
Vps13aQ5H8C4 Gm42208-201ENSMUST00000198215 670 ntTSL 3 BASIC10.83□□□□□ -0.68
Vps13aQ5H8C4 Gm42859-201ENSMUST00000199572 193 ntBASIC10.83□□□□□ -0.68
Vps13aQ5H8C4 Gimd1-205ENSMUST00000212852 1234 ntTSL 5 BASIC10.83□□□□□ -0.68
Vps13aQ5H8C4 AC134793.1-202ENSMUST00000227444 803 ntBASIC10.83□□□□□ -0.68
Vps13aQ5H8C4 Gm10015-201ENSMUST00000072570 465 ntBASIC10.83□□□□□ -0.68
Vps13aQ5H8C4 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Vps13aQ5H8C4 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Vps13aQ5H8C4 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC10.83□□□□□ -0.68
Vps13aQ5H8C4 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Vps13aQ5H8C4 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Vps13aQ5H8C4 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Vps13aQ5H8C4 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Vps13aQ5H8C4 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Vps13aQ5H8C4 AC155245.1-201ENSMUST00000222266 1804 ntBASIC10.82□□□□□ -0.68
Vps13aQ5H8C4 Hspa12b-202ENSMUST00000100763 628 ntTSL 2 BASIC10.82□□□□□ -0.68
Vps13aQ5H8C4 Gm4917-201ENSMUST00000121452 650 ntBASIC10.82□□□□□ -0.68
Vps13aQ5H8C4 1810058I24Rik-201ENSMUST00000130875 690 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Vps13aQ5H8C4 Stk33-205ENSMUST00000141210 949 ntTSL 3 BASIC10.82□□□□□ -0.68
Vps13aQ5H8C4 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC10.82□□□□□ -0.68
Vps13aQ5H8C4 Gm18119-201ENSMUST00000219972 616 ntBASIC10.82□□□□□ -0.68
Vps13aQ5H8C4 Kcnk2-209ENSMUST00000194402 1373 ntTSL 5 BASIC10.82□□□□□ -0.68
Vps13aQ5H8C4 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Vps13aQ5H8C4 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Vps13aQ5H8C4 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Vps13aQ5H8C4 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Vps13aQ5H8C4 Gm3404-201ENSMUST00000110596 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Vps13aQ5H8C4 Zfp961-204ENSMUST00000136516 601 ntTSL 2 BASIC10.82□□□□□ -0.68
Vps13aQ5H8C4 Gm13857-201ENSMUST00000139645 173 ntBASIC10.82□□□□□ -0.68
Vps13aQ5H8C4 Rps18-206ENSMUST00000174609 527 ntTSL 2 BASIC10.82□□□□□ -0.68
Vps13aQ5H8C4 Gm17733-201ENSMUST00000181883 1048 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Vps13aQ5H8C4 Fgfbp1-203ENSMUST00000199894 1228 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
Vps13aQ5H8C4 AC122024.3-201ENSMUST00000217719 294 ntBASIC10.82□□□□□ -0.68
Vps13aQ5H8C4 CR974487.1-201ENSMUST00000220984 413 ntBASIC10.82□□□□□ -0.68
Vps13aQ5H8C4 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
Vps13aQ5H8C4 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Vps13aQ5H8C4 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Vps13aQ5H8C4 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Vps13aQ5H8C4 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Vps13aQ5H8C4 Fbxo40-202ENSMUST00000114806 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Vps13aQ5H8C4 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC10.82□□□□□ -0.68
Vps13aQ5H8C4 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Vps13aQ5H8C4 Theg-201ENSMUST00000020566 1444 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
Vps13aQ5H8C4 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Vps13aQ5H8C4 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Vps13aQ5H8C4 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Vps13aQ5H8C4 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Vps13aQ5H8C4 Igsf5-204ENSMUST00000113795 1031 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vps13aQ5H8C4 Cfap100-202ENSMUST00000127508 417 ntTSL 2 BASIC10.81□□□□□ -0.68
Vps13aQ5H8C4 Ints5-203ENSMUST00000191089 568 ntTSL 5 BASIC10.81□□□□□ -0.68
Vps13aQ5H8C4 Gm31678-201ENSMUST00000198262 454 ntTSL 3 BASIC10.81□□□□□ -0.68
Vps13aQ5H8C4 Gm43122-202ENSMUST00000202259 526 ntTSL 2 BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms