Protein–RNA interactions for Protein: Q4FJU9

Tmem40, Transmembrane protein 40, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem40Q4FJU9 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC9.94□□□□□ -0.82
Tmem40Q4FJU9 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Tmem40Q4FJU9 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Tmem40Q4FJU9 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC9.94□□□□□ -0.82
Tmem40Q4FJU9 Gm1995-201ENSMUST00000220838 2602 ntBASIC9.94□□□□□ -0.82
Tmem40Q4FJU9 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Tmem40Q4FJU9 Ccnb2-ps-202ENSMUST00000170898 2296 ntBASIC9.94□□□□□ -0.82
Tmem40Q4FJU9 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Tmem40Q4FJU9 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Tmem40Q4FJU9 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Tmem40Q4FJU9 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC9.94□□□□□ -0.82
Tmem40Q4FJU9 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Tmem40Q4FJU9 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Tmem40Q4FJU9 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Tmem40Q4FJU9 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Tmem40Q4FJU9 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Tmem40Q4FJU9 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC9.94□□□□□ -0.82
Tmem40Q4FJU9 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Tmem40Q4FJU9 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Tmem40Q4FJU9 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Tmem40Q4FJU9 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Tmem40Q4FJU9 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Tmem40Q4FJU9 Smgc-204ENSMUST00000109277 855 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Tmem40Q4FJU9 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC9.94□□□□□ -0.82
Tmem40Q4FJU9 Gm11949-201ENSMUST00000117640 372 ntBASIC9.94□□□□□ -0.82
Tmem40Q4FJU9 Gm15352-201ENSMUST00000118696 270 ntBASIC9.94□□□□□ -0.82
Tmem40Q4FJU9 Gm11255-201ENSMUST00000120448 1180 ntBASIC9.94□□□□□ -0.82
Tmem40Q4FJU9 Gm12899-201ENSMUST00000120565 551 ntBASIC9.94□□□□□ -0.82
Tmem40Q4FJU9 Gm1866-201ENSMUST00000120701 477 ntBASIC9.94□□□□□ -0.82
Tmem40Q4FJU9 Gm8737-201ENSMUST00000122208 642 ntBASIC9.94□□□□□ -0.82
Tmem40Q4FJU9 Gm14095-201ENSMUST00000134264 516 ntTSL 3 BASIC9.94□□□□□ -0.82
Tmem40Q4FJU9 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC9.94□□□□□ -0.82
Tmem40Q4FJU9 Gm25332-201ENSMUST00000158038 105 ntBASIC9.94□□□□□ -0.82
Tmem40Q4FJU9 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Tmem40Q4FJU9 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Tmem40Q4FJU9 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC9.94□□□□□ -0.82
Tmem40Q4FJU9 Gm43186-201ENSMUST00000198130 824 ntBASIC9.94□□□□□ -0.82
Tmem40Q4FJU9 Gm44296-201ENSMUST00000204689 681 ntTSL 3 BASIC9.94□□□□□ -0.82
Tmem40Q4FJU9 Gm44980-201ENSMUST00000205826 314 ntBASIC9.94□□□□□ -0.82
Tmem40Q4FJU9 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC9.94□□□□□ -0.82
Tmem40Q4FJU9 Gm17931-201ENSMUST00000208132 634 ntBASIC9.94□□□□□ -0.82
Tmem40Q4FJU9 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Tmem40Q4FJU9 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC9.94□□□□□ -0.82
Tmem40Q4FJU9 CAAA01216754.4-201ENSMUST00000216416 802 ntTSL 5 BASIC9.94□□□□□ -0.82
Tmem40Q4FJU9 CAAA01216754.4-203ENSMUST00000217178 1097 ntTSL 5 BASIC9.94□□□□□ -0.82
Tmem40Q4FJU9 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC9.94□□□□□ -0.82
Tmem40Q4FJU9 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC9.94□□□□□ -0.82
Tmem40Q4FJU9 Acrbp-201ENSMUST00000032481 584 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Tmem40Q4FJU9 Vmn1r76-201ENSMUST00000058772 975 ntAPPRIS P2 BASIC9.94□□□□□ -0.82
Tmem40Q4FJU9 Gm25517-201ENSMUST00000083865 134 ntBASIC9.94□□□□□ -0.82
Tmem40Q4FJU9 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Tmem40Q4FJU9 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Tmem40Q4FJU9 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Tmem40Q4FJU9 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC9.94□□□□□ -0.82
Tmem40Q4FJU9 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC9.94□□□□□ -0.82
Tmem40Q4FJU9 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC9.94□□□□□ -0.82
Tmem40Q4FJU9 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Tmem40Q4FJU9 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Tmem40Q4FJU9 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Tmem40Q4FJU9 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Tmem40Q4FJU9 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Tmem40Q4FJU9 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Tmem40Q4FJU9 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Tmem40Q4FJU9 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Tmem40Q4FJU9 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Tmem40Q4FJU9 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Tmem40Q4FJU9 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC9.94□□□□□ -0.82
Tmem40Q4FJU9 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Tmem40Q4FJU9 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Tmem40Q4FJU9 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Tmem40Q4FJU9 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Tmem40Q4FJU9 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Tmem40Q4FJU9 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Tmem40Q4FJU9 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC9.93□□□□□ -0.82
Tmem40Q4FJU9 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Tmem40Q4FJU9 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Tmem40Q4FJU9 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Tmem40Q4FJU9 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
Tmem40Q4FJU9 Gm8155-201ENSMUST00000216363 1612 ntBASIC9.93□□□□□ -0.82
Tmem40Q4FJU9 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Tmem40Q4FJU9 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Tmem40Q4FJU9 Cntnap2-201ENSMUST00000060839 1540 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Tmem40Q4FJU9 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Tmem40Q4FJU9 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Tmem40Q4FJU9 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Tmem40Q4FJU9 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Tmem40Q4FJU9 Olfr464-205ENSMUST00000217112 2232 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Tmem40Q4FJU9 Gm6741-201ENSMUST00000057074 1330 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Tmem40Q4FJU9 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC9.93□□□□□ -0.82
Tmem40Q4FJU9 Gm5419-201ENSMUST00000119301 527 ntBASIC9.93□□□□□ -0.82
Tmem40Q4FJU9 Gm13626-201ENSMUST00000119435 402 ntBASIC9.93□□□□□ -0.82
Tmem40Q4FJU9 Gm14525-201ENSMUST00000119649 893 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Tmem40Q4FJU9 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Tmem40Q4FJU9 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC9.93□□□□□ -0.82
Tmem40Q4FJU9 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC9.93□□□□□ -0.82
Tmem40Q4FJU9 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC9.93□□□□□ -0.82
Tmem40Q4FJU9 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC9.93□□□□□ -0.82
Tmem40Q4FJU9 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Tmem40Q4FJU9 Gm23045-201ENSMUST00000175041 96 ntBASIC9.93□□□□□ -0.82
Tmem40Q4FJU9 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 71.8 ms