Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC10.36□□□□□ -0.75
Spg11Q3UHA3 Gm28453-201ENSMUST00000185556 1323 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Spg11Q3UHA3 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Spg11Q3UHA3 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Spg11Q3UHA3 Lgals9-203ENSMUST00000108269 1586 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Spg11Q3UHA3 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Spg11Q3UHA3 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Spg11Q3UHA3 Gm5822-201ENSMUST00000161562 1378 ntBASIC10.36□□□□□ -0.75
Spg11Q3UHA3 AC154197.1-201ENSMUST00000225136 1382 ntBASIC10.36□□□□□ -0.75
Spg11Q3UHA3 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Spg11Q3UHA3 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Spg11Q3UHA3 Gm15965-201ENSMUST00000123318 1428 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Spg11Q3UHA3 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC10.35□□□□□ -0.75
Spg11Q3UHA3 Gm44851-201ENSMUST00000205735 2309 ntBASIC10.35□□□□□ -0.75
Spg11Q3UHA3 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Spg11Q3UHA3 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Spg11Q3UHA3 Gm25148-201ENSMUST00000104611 123 ntBASIC10.35□□□□□ -0.75
Spg11Q3UHA3 4930529I22Rik-201ENSMUST00000131509 589 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Spg11Q3UHA3 Gm13027-201ENSMUST00000135858 241 ntTSL 5 BASIC10.35□□□□□ -0.75
Spg11Q3UHA3 Gm17107-201ENSMUST00000170983 553 ntBASIC10.35□□□□□ -0.75
Spg11Q3UHA3 Gast-201ENSMUST00000017309 460 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Spg11Q3UHA3 Gm27200-201ENSMUST00000184626 657 ntTSL 3 BASIC10.35□□□□□ -0.75
Spg11Q3UHA3 Ighv1-33-201ENSMUST00000193220 350 ntBASIC10.35□□□□□ -0.75
Spg11Q3UHA3 Gm7210-201ENSMUST00000209309 1067 ntBASIC10.35□□□□□ -0.75
Spg11Q3UHA3 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Spg11Q3UHA3 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Spg11Q3UHA3 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Spg11Q3UHA3 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Spg11Q3UHA3 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Spg11Q3UHA3 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Spg11Q3UHA3 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Spg11Q3UHA3 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Spg11Q3UHA3 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Spg11Q3UHA3 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Spg11Q3UHA3 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Spg11Q3UHA3 Dpep2-202ENSMUST00000117555 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Spg11Q3UHA3 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Spg11Q3UHA3 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Spg11Q3UHA3 Gm5174-201ENSMUST00000171131 1423 ntBASIC10.35□□□□□ -0.75
Spg11Q3UHA3 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Spg11Q3UHA3 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Spg11Q3UHA3 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Spg11Q3UHA3 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Spg11Q3UHA3 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Spg11Q3UHA3 Gm14231-201ENSMUST00000120090 592 ntBASIC10.35□□□□□ -0.75
Spg11Q3UHA3 Gm6276-201ENSMUST00000120159 579 ntBASIC10.35□□□□□ -0.75
Spg11Q3UHA3 Gm15839-201ENSMUST00000138684 612 ntTSL 3 BASIC10.35□□□□□ -0.75
Spg11Q3UHA3 Gm12916-201ENSMUST00000139012 948 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Spg11Q3UHA3 Gm12207-201ENSMUST00000143016 494 ntTSL 2 BASIC10.35□□□□□ -0.75
Spg11Q3UHA3 Gm5766-202ENSMUST00000161633 799 ntBASIC10.35□□□□□ -0.75
Spg11Q3UHA3 Gm8488-201ENSMUST00000176112 1280 ntBASIC10.35□□□□□ -0.75
Spg11Q3UHA3 Pea15b-202ENSMUST00000183185 555 ntBASIC10.35□□□□□ -0.75
Spg11Q3UHA3 Gm8174-201ENSMUST00000064353 1001 ntBASIC10.35□□□□□ -0.75
Spg11Q3UHA3 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Spg11Q3UHA3 Klk1b22-201ENSMUST00000077528 855 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Spg11Q3UHA3 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Spg11Q3UHA3 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Spg11Q3UHA3 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Spg11Q3UHA3 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Spg11Q3UHA3 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Spg11Q3UHA3 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC10.35□□□□□ -0.75
Spg11Q3UHA3 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Spg11Q3UHA3 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Spg11Q3UHA3 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Spg11Q3UHA3 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Spg11Q3UHA3 Gm16439-201ENSMUST00000100687 564 ntBASIC10.34□□□□□ -0.75
Spg11Q3UHA3 Gm12481-201ENSMUST00000102482 297 ntBASIC10.34□□□□□ -0.75
Spg11Q3UHA3 Gm15702-201ENSMUST00000119680 444 ntBASIC10.34□□□□□ -0.75
Spg11Q3UHA3 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC10.34□□□□□ -0.75
Spg11Q3UHA3 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Spg11Q3UHA3 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Spg11Q3UHA3 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Spg11Q3UHA3 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Spg11Q3UHA3 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Spg11Q3UHA3 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Spg11Q3UHA3 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Spg11Q3UHA3 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Spg11Q3UHA3 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Spg11Q3UHA3 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Spg11Q3UHA3 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Spg11Q3UHA3 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Spg11Q3UHA3 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Spg11Q3UHA3 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Spg11Q3UHA3 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Spg11Q3UHA3 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Spg11Q3UHA3 Mir675-201ENSMUST00000102320 84 ntBASIC10.34□□□□□ -0.75
Spg11Q3UHA3 Gm16418-201ENSMUST00000118577 171 ntBASIC10.34□□□□□ -0.75
Spg11Q3UHA3 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Spg11Q3UHA3 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC10.34□□□□□ -0.75
Spg11Q3UHA3 Olfr1057-201ENSMUST00000099892 948 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Spg11Q3UHA3 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Spg11Q3UHA3 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Spg11Q3UHA3 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Spg11Q3UHA3 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Spg11Q3UHA3 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Spg11Q3UHA3 Rack1-201ENSMUST00000020640 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Spg11Q3UHA3 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Spg11Q3UHA3 Gm5385-201ENSMUST00000118988 1559 ntBASIC10.33□□□□□ -0.76
Spg11Q3UHA3 Olfr464-205ENSMUST00000217112 2232 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Spg11Q3UHA3 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms