Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim43aQ3TL54 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim43aQ3TL54 Gm9072-201ENSMUST00000218390 1514 ntBASIC11.96□□□□□ -0.49
Trim43aQ3TL54 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim43aQ3TL54 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trim43aQ3TL54 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim43aQ3TL54 Gm5124-202ENSMUST00000132683 2083 ntBASIC11.96□□□□□ -0.49
Trim43aQ3TL54 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trim43aQ3TL54 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim43aQ3TL54 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim43aQ3TL54 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Trim43aQ3TL54 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim43aQ3TL54 AC107453.4-201ENSMUST00000227068 1817 ntBASIC11.96□□□□□ -0.49
Trim43aQ3TL54 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim43aQ3TL54 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trim43aQ3TL54 Gm4909-201ENSMUST00000118749 794 ntBASIC11.96□□□□□ -0.49
Trim43aQ3TL54 Gm4760-201ENSMUST00000119663 1030 ntBASIC11.96□□□□□ -0.49
Trim43aQ3TL54 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC11.96□□□□□ -0.49
Trim43aQ3TL54 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim43aQ3TL54 Rn7s1-201ENSMUST00000174924 300 ntBASIC11.96□□□□□ -0.49
Trim43aQ3TL54 Rn7s2-201ENSMUST00000175032 300 ntBASIC11.96□□□□□ -0.49
Trim43aQ3TL54 Gm26461-201ENSMUST00000175064 290 ntBASIC11.96□□□□□ -0.49
Trim43aQ3TL54 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC11.96□□□□□ -0.49
Trim43aQ3TL54 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim43aQ3TL54 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC11.96□□□□□ -0.49
Trim43aQ3TL54 Gm4978-201ENSMUST00000071565 801 ntBASIC11.96□□□□□ -0.49
Trim43aQ3TL54 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trim43aQ3TL54 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim43aQ3TL54 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trim43aQ3TL54 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Trim43aQ3TL54 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trim43aQ3TL54 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC11.96□□□□□ -0.5
Trim43aQ3TL54 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trim43aQ3TL54 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Trim43aQ3TL54 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trim43aQ3TL54 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trim43aQ3TL54 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trim43aQ3TL54 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trim43aQ3TL54 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trim43aQ3TL54 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim43aQ3TL54 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim43aQ3TL54 AC155245.1-201ENSMUST00000222266 1804 ntBASIC11.95□□□□□ -0.5
Trim43aQ3TL54 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim43aQ3TL54 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trim43aQ3TL54 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim43aQ3TL54 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trim43aQ3TL54 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim43aQ3TL54 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trim43aQ3TL54 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trim43aQ3TL54 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim43aQ3TL54 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim43aQ3TL54 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim43aQ3TL54 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC11.95□□□□□ -0.5
Trim43aQ3TL54 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trim43aQ3TL54 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Trim43aQ3TL54 Gm24990-201ENSMUST00000157406 323 ntBASIC11.95□□□□□ -0.5
Trim43aQ3TL54 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trim43aQ3TL54 Gm5342-201ENSMUST00000181982 1003 ntBASIC11.95□□□□□ -0.5
Trim43aQ3TL54 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trim43aQ3TL54 Gstp-ps-201ENSMUST00000195526 631 ntBASIC11.95□□□□□ -0.5
Trim43aQ3TL54 Gm43184-201ENSMUST00000197247 542 ntBASIC11.95□□□□□ -0.5
Trim43aQ3TL54 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
Trim43aQ3TL54 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC11.95□□□□□ -0.5
Trim43aQ3TL54 Mettl6-204ENSMUST00000227595 1027 ntBASIC11.95□□□□□ -0.5
Trim43aQ3TL54 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
Trim43aQ3TL54 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Trim43aQ3TL54 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trim43aQ3TL54 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim43aQ3TL54 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trim43aQ3TL54 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trim43aQ3TL54 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
Trim43aQ3TL54 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim43aQ3TL54 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trim43aQ3TL54 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Trim43aQ3TL54 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim43aQ3TL54 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trim43aQ3TL54 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Trim43aQ3TL54 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Trim43aQ3TL54 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC11.94□□□□□ -0.5
Trim43aQ3TL54 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim43aQ3TL54 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim43aQ3TL54 Gm5703-201ENSMUST00000186658 3973 ntBASIC11.94□□□□□ -0.5
Trim43aQ3TL54 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim43aQ3TL54 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim43aQ3TL54 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim43aQ3TL54 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trim43aQ3TL54 Gm14277-201ENSMUST00000121195 360 ntBASIC11.94□□□□□ -0.5
Trim43aQ3TL54 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC11.94□□□□□ -0.5
Trim43aQ3TL54 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Trim43aQ3TL54 Gm5616-201ENSMUST00000165252 384 ntBASIC11.94□□□□□ -0.5
Trim43aQ3TL54 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC11.94□□□□□ -0.5
Trim43aQ3TL54 Gm8741-201ENSMUST00000174736 384 ntBASIC11.94□□□□□ -0.5
Trim43aQ3TL54 Gm25700-201ENSMUST00000177693 110 ntBASIC11.94□□□□□ -0.5
Trim43aQ3TL54 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trim43aQ3TL54 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC11.94□□□□□ -0.5
Trim43aQ3TL54 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC11.94□□□□□ -0.5
Trim43aQ3TL54 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim43aQ3TL54 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Trim43aQ3TL54 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim43aQ3TL54 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms