Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC11.48□□□□□ -0.57
Ebf1Q07802 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC11.48□□□□□ -0.57
Ebf1Q07802 AC153152.3-201ENSMUST00000222188 1135 ntBASIC11.48□□□□□ -0.57
Ebf1Q07802 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ebf1Q07802 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Ebf1Q07802 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ebf1Q07802 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ebf1Q07802 Gm18642-201ENSMUST00000206642 1400 ntBASIC11.48□□□□□ -0.57
Ebf1Q07802 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ebf1Q07802 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ebf1Q07802 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ebf1Q07802 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ebf1Q07802 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ebf1Q07802 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ebf1Q07802 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ebf1Q07802 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC11.48□□□□□ -0.57
Ebf1Q07802 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Ebf1Q07802 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ebf1Q07802 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ebf1Q07802 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ebf1Q07802 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ebf1Q07802 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ebf1Q07802 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ebf1Q07802 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ebf1Q07802 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ebf1Q07802 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ebf1Q07802 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC11.47□□□□□ -0.57
Ebf1Q07802 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ebf1Q07802 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ebf1Q07802 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC11.47□□□□□ -0.57
Ebf1Q07802 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ebf1Q07802 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ebf1Q07802 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ebf1Q07802 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ebf1Q07802 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ebf1Q07802 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ebf1Q07802 Gm18294-201ENSMUST00000176980 1748 ntBASIC11.47□□□□□ -0.57
Ebf1Q07802 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ebf1Q07802 AC158636.1-201ENSMUST00000220118 1393 ntBASIC11.47□□□□□ -0.57
Ebf1Q07802 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Ebf1Q07802 Gm12218-201ENSMUST00000117666 399 ntBASIC11.47□□□□□ -0.57
Ebf1Q07802 Gm12948-201ENSMUST00000119406 682 ntBASIC11.47□□□□□ -0.57
Ebf1Q07802 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC11.47□□□□□ -0.57
Ebf1Q07802 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC11.47□□□□□ -0.57
Ebf1Q07802 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC11.47□□□□□ -0.57
Ebf1Q07802 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC11.47□□□□□ -0.57
Ebf1Q07802 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ebf1Q07802 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Ebf1Q07802 Gm6548-201ENSMUST00000167498 1165 ntBASIC11.47□□□□□ -0.57
Ebf1Q07802 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Ebf1Q07802 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Ebf1Q07802 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11.47□□□□□ -0.57
Ebf1Q07802 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC11.47□□□□□ -0.57
Ebf1Q07802 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ebf1Q07802 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC11.47□□□□□ -0.57
Ebf1Q07802 Gm6423-201ENSMUST00000204315 934 ntBASIC11.47□□□□□ -0.57
Ebf1Q07802 Gm39288-201ENSMUST00000210554 446 ntBASIC11.47□□□□□ -0.57
Ebf1Q07802 Gm19640-201ENSMUST00000214849 464 ntBASIC11.47□□□□□ -0.57
Ebf1Q07802 Gm18968-201ENSMUST00000221319 862 ntBASIC11.47□□□□□ -0.57
Ebf1Q07802 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Ebf1Q07802 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Ebf1Q07802 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC11.47□□□□□ -0.57
Ebf1Q07802 Gm5468-202ENSMUST00000227851 682 ntBASIC11.47□□□□□ -0.57
Ebf1Q07802 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ebf1Q07802 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Ebf1Q07802 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ebf1Q07802 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ebf1Q07802 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ebf1Q07802 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ebf1Q07802 Gm38292-201ENSMUST00000192646 3045 ntBASIC11.47□□□□□ -0.57
Ebf1Q07802 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ebf1Q07802 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ebf1Q07802 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ebf1Q07802 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ebf1Q07802 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Ebf1Q07802 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ebf1Q07802 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ebf1Q07802 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ebf1Q07802 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ebf1Q07802 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ebf1Q07802 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC11.46□□□□□ -0.57
Ebf1Q07802 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.57
Ebf1Q07802 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ebf1Q07802 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ebf1Q07802 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ebf1Q07802 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ebf1Q07802 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Ebf1Q07802 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ebf1Q07802 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Ebf1Q07802 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ebf1Q07802 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ebf1Q07802 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
Ebf1Q07802 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Ebf1Q07802 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Ebf1Q07802 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Ebf1Q07802 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC11.46□□□□□ -0.57
Ebf1Q07802 Gm14274-201ENSMUST00000117182 615 ntBASIC11.46□□□□□ -0.57
Ebf1Q07802 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Ebf1Q07802 Gm13422-201ENSMUST00000118834 504 ntBASIC11.46□□□□□ -0.57
Ebf1Q07802 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms