Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Gm7525-201ENSMUST00000219425 454 ntBASIC12.22□□□□□ -0.45
CiitaP79621 AC154305.2-201ENSMUST00000225813 901 ntBASIC12.22□□□□□ -0.45
CiitaP79621 AC099645.1-201ENSMUST00000226476 1105 ntBASIC12.22□□□□□ -0.45
CiitaP79621 Gm5805-201ENSMUST00000072779 456 ntBASIC12.22□□□□□ -0.45
CiitaP79621 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
CiitaP79621 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CiitaP79621 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CiitaP79621 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CiitaP79621 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CiitaP79621 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CiitaP79621 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CiitaP79621 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CiitaP79621 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
CiitaP79621 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CiitaP79621 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
CiitaP79621 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
CiitaP79621 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CiitaP79621 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CiitaP79621 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CiitaP79621 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CiitaP79621 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
CiitaP79621 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CiitaP79621 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CiitaP79621 Gm43972-201ENSMUST00000181398 1467 ntBASIC12.21□□□□□ -0.45
CiitaP79621 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
CiitaP79621 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CiitaP79621 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
CiitaP79621 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC12.21□□□□□ -0.45
CiitaP79621 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
CiitaP79621 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CiitaP79621 AC167565.1-201ENSMUST00000226980 1833 ntBASIC12.21□□□□□ -0.45
CiitaP79621 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CiitaP79621 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
CiitaP79621 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CiitaP79621 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CiitaP79621 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
CiitaP79621 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CiitaP79621 Vmn1r38-201ENSMUST00000226457 3462 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
CiitaP79621 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.21□□□□□ -0.45
CiitaP79621 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CiitaP79621 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
CiitaP79621 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CiitaP79621 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CiitaP79621 Gm3828-201ENSMUST00000121817 257 ntBASIC12.21□□□□□ -0.45
CiitaP79621 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CiitaP79621 Gm4982-201ENSMUST00000160440 1098 ntBASIC12.21□□□□□ -0.45
CiitaP79621 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
CiitaP79621 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC12.21□□□□□ -0.45
CiitaP79621 Gm9081-201ENSMUST00000182346 991 ntBASIC12.21□□□□□ -0.45
CiitaP79621 Gm18776-201ENSMUST00000188833 654 ntBASIC12.21□□□□□ -0.45
CiitaP79621 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CiitaP79621 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
CiitaP79621 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC12.21□□□□□ -0.45
CiitaP79621 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC12.21□□□□□ -0.45
CiitaP79621 Gm7082-201ENSMUST00000209880 969 ntBASIC12.21□□□□□ -0.45
CiitaP79621 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
CiitaP79621 Gm18514-201ENSMUST00000218980 436 ntBASIC12.21□□□□□ -0.45
CiitaP79621 Gm18968-201ENSMUST00000221319 862 ntBASIC12.21□□□□□ -0.45
CiitaP79621 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.45
CiitaP79621 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CiitaP79621 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
CiitaP79621 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CiitaP79621 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CiitaP79621 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
CiitaP79621 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
CiitaP79621 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.21□□□□□ -0.46
CiitaP79621 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CiitaP79621 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
CiitaP79621 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.21□□□□□ -0.46
CiitaP79621 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
CiitaP79621 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
CiitaP79621 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
CiitaP79621 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC12.2□□□□□ -0.46
CiitaP79621 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC12.2□□□□□ -0.46
CiitaP79621 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CiitaP79621 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CiitaP79621 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CiitaP79621 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CiitaP79621 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CiitaP79621 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CiitaP79621 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC12.2□□□□□ -0.46
CiitaP79621 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CiitaP79621 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CiitaP79621 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
CiitaP79621 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CiitaP79621 AC174797.1-201ENSMUST00000224339 1649 ntBASIC12.2□□□□□ -0.46
CiitaP79621 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CiitaP79621 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CiitaP79621 Gm25053-201ENSMUST00000103982 133 ntBASIC12.2□□□□□ -0.46
CiitaP79621 Gm25922-201ENSMUST00000104281 130 ntBASIC12.2□□□□□ -0.46
CiitaP79621 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CiitaP79621 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC12.2□□□□□ -0.46
CiitaP79621 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC12.2□□□□□ -0.46
CiitaP79621 Gm14807-201ENSMUST00000116640 983 ntBASIC12.2□□□□□ -0.46
CiitaP79621 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC12.2□□□□□ -0.46
CiitaP79621 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC12.2□□□□□ -0.46
CiitaP79621 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC12.2□□□□□ -0.46
CiitaP79621 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CiitaP79621 Gm22379-201ENSMUST00000157480 131 ntBASIC12.2□□□□□ -0.46
CiitaP79621 Gm24679-201ENSMUST00000158762 111 ntBASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms