Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shox2P70390 Gm10804-201ENSMUST00000099693 2244 ntTSL 2 BASIC11.09□□□□□ -0.63
Shox2P70390 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Shox2P70390 Eif4e1b-201ENSMUST00000110003 2131 ntAPPRIS P3 TSL 2 BASIC11.09□□□□□ -0.63
Shox2P70390 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shox2P70390 Gpm6b-206ENSMUST00000112228 3083 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Shox2P70390 Gm26809-201ENSMUST00000180863 2981 ntTSL 5 BASIC11.09□□□□□ -0.63
Shox2P70390 Stra6-201ENSMUST00000034880 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shox2P70390 CT025639.2-202ENSMUST00000225298 1630 ntBASIC11.09□□□□□ -0.63
Shox2P70390 Gm42851-201ENSMUST00000201325 1411 ntBASIC11.09□□□□□ -0.63
Shox2P70390 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shox2P70390 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
Shox2P70390 Raf1-202ENSMUST00000112949 2946 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Shox2P70390 Atp6v0a4-201ENSMUST00000040259 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Shox2P70390 Ccdc62-202ENSMUST00000165148 3920 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Shox2P70390 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Shox2P70390 Fut10-201ENSMUST00000066173 3183 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Shox2P70390 St5-203ENSMUST00000084738 3161 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Shox2P70390 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Shox2P70390 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Shox2P70390 Gm45867-201ENSMUST00000208201 2317 ntBASIC11.08□□□□□ -0.64
Shox2P70390 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Shox2P70390 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Shox2P70390 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Shox2P70390 Gm43972-201ENSMUST00000181398 1467 ntBASIC11.08□□□□□ -0.64
Shox2P70390 Dhdds-209ENSMUST00000144668 3219 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Shox2P70390 Ctcfl-201ENSMUST00000094287 3217 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Shox2P70390 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC11.08□□□□□ -0.64
Shox2P70390 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC11.08□□□□□ -0.64
Shox2P70390 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC11.08□□□□□ -0.64
Shox2P70390 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Shox2P70390 Gm11658-201ENSMUST00000120913 1008 ntBASIC11.08□□□□□ -0.64
Shox2P70390 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Shox2P70390 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Shox2P70390 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC11.08□□□□□ -0.64
Shox2P70390 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Shox2P70390 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Shox2P70390 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Shox2P70390 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Shox2P70390 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC11.08□□□□□ -0.64
Shox2P70390 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Shox2P70390 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Shox2P70390 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Shox2P70390 Tada2a-201ENSMUST00000018795 2151 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Shox2P70390 AC167669.2-201ENSMUST00000224417 1620 ntBASIC11.08□□□□□ -0.64
Shox2P70390 Gm37242-201ENSMUST00000191873 2085 ntBASIC11.08□□□□□ -0.64
Shox2P70390 Gm498-202ENSMUST00000152910 1507 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Shox2P70390 Gm45199-201ENSMUST00000207640 1507 ntBASIC11.08□□□□□ -0.64
Shox2P70390 Nlrx1-201ENSMUST00000034621 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Shox2P70390 Skp2-201ENSMUST00000096482 3118 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Shox2P70390 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Shox2P70390 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Shox2P70390 4933413C19Rik-201ENSMUST00000162380 2217 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Shox2P70390 Trim69-201ENSMUST00000036089 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Shox2P70390 Aco2-201ENSMUST00000023116 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Shox2P70390 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Shox2P70390 Duoxa1-203ENSMUST00000110538 2467 ntTSL 5 BASIC11.08□□□□□ -0.64
Shox2P70390 Dusp16-202ENSMUST00000129433 3993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Shox2P70390 Rab3c-202ENSMUST00000223922 2398 ntBASIC11.08□□□□□ -0.64
Shox2P70390 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Shox2P70390 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC11.07□□□□□ -0.64
Shox2P70390 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Shox2P70390 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Shox2P70390 Dnm2-202ENSMUST00000091087 3450 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Shox2P70390 Ahrr-202ENSMUST00000109640 2419 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Shox2P70390 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Shox2P70390 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Shox2P70390 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Shox2P70390 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Shox2P70390 Eef2-201ENSMUST00000047864 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Shox2P70390 Upp2-201ENSMUST00000059102 2498 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Shox2P70390 Olfr71-203ENSMUST00000217544 2707 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Shox2P70390 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Shox2P70390 Gm25214-201ENSMUST00000104573 129 ntBASIC11.07□□□□□ -0.64
Shox2P70390 Gm17151-201ENSMUST00000105760 367 ntTSL 3 BASIC11.07□□□□□ -0.64
Shox2P70390 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Shox2P70390 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC11.07□□□□□ -0.64
Shox2P70390 Mir1247-201ENSMUST00000116706 82 ntBASIC11.07□□□□□ -0.64
Shox2P70390 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Shox2P70390 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC11.07□□□□□ -0.64
Shox2P70390 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Shox2P70390 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Shox2P70390 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Shox2P70390 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC11.07□□□□□ -0.64
Shox2P70390 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Shox2P70390 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC11.07□□□□□ -0.64
Shox2P70390 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Shox2P70390 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Shox2P70390 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Shox2P70390 Gm9908-201ENSMUST00000211534 448 ntBASIC11.07□□□□□ -0.64
Shox2P70390 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC11.07□□□□□ -0.64
Shox2P70390 AC154222.2-201ENSMUST00000225848 607 ntBASIC11.07□□□□□ -0.64
Shox2P70390 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Shox2P70390 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Shox2P70390 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Shox2P70390 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Shox2P70390 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Shox2P70390 Sncaip-201ENSMUST00000025413 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Shox2P70390 Gm5403-201ENSMUST00000117105 2795 ntBASIC11.07□□□□□ -0.64
Shox2P70390 Wars-205ENSMUST00000161410 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms