Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 AC153379.1-201ENSMUST00000218174 485 ntTSL 3 BASIC18.13■□□□□ 0.49
Cux2P70298 AC123061.1-201ENSMUST00000228021 999 ntBASIC18.13■□□□□ 0.49
Cux2P70298 Scgb3a1-201ENSMUST00000043873 493 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cux2P70298 Scgb3a1-202ENSMUST00000076006 598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cux2P70298 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cux2P70298 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cux2P70298 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cux2P70298 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC18.13■□□□□ 0.49
Cux2P70298 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cux2P70298 Oprm1-213ENSMUST00000105604 1616 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
Cux2P70298 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Cux2P70298 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC18.13■□□□□ 0.49
Cux2P70298 Gm38246-201ENSMUST00000194318 1511 ntBASIC18.13■□□□□ 0.49
Cux2P70298 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cux2P70298 Gm42833-201ENSMUST00000196019 2124 ntBASIC18.12■□□□□ 0.49
Cux2P70298 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cux2P70298 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cux2P70298 4930447F24Rik-201ENSMUST00000194140 1341 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cux2P70298 AC124561.1-202ENSMUST00000228652 1929 ntBASIC18.12■□□□□ 0.49
Cux2P70298 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cux2P70298 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cux2P70298 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Cux2P70298 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cux2P70298 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cux2P70298 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cux2P70298 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC18.12■□□□□ 0.49
Cux2P70298 Rffl-201ENSMUST00000021036 1719 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cux2P70298 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
Cux2P70298 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cux2P70298 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC18.12■□□□□ 0.49
Cux2P70298 Fgf1-203ENSMUST00000117566 418 ntTSL 5 BASIC18.12■□□□□ 0.49
Cux2P70298 Gm13372-201ENSMUST00000123129 688 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cux2P70298 Gm16322-202ENSMUST00000141275 700 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cux2P70298 Tead1-211ENSMUST00000170352 1218 ntTSL 5 BASIC18.12■□□□□ 0.49
Cux2P70298 Fam240a-201ENSMUST00000177678 499 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Cux2P70298 C430039J16Rik-201ENSMUST00000181148 658 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cux2P70298 Gm28893-201ENSMUST00000190951 1108 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cux2P70298 Gm31466-201ENSMUST00000195457 916 ntTSL 3 BASIC18.12■□□□□ 0.49
Cux2P70298 Gm43667-201ENSMUST00000198616 1095 ntBASIC18.12■□□□□ 0.49
Cux2P70298 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC18.12■□□□□ 0.49
Cux2P70298 AC166061.1-201ENSMUST00000225163 1138 ntBASIC18.12■□□□□ 0.49
Cux2P70298 AC114585.2-201ENSMUST00000227693 486 ntBASIC18.12■□□□□ 0.49
Cux2P70298 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cux2P70298 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Cux2P70298 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cux2P70298 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cux2P70298 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cux2P70298 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cux2P70298 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cux2P70298 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
Cux2P70298 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cux2P70298 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cux2P70298 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cux2P70298 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cux2P70298 Rps6-201ENSMUST00000102814 878 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cux2P70298 Mir291b-201ENSMUST00000104838 79 ntBASIC18.11■□□□□ 0.49
Cux2P70298 Gm13215-201ENSMUST00000117559 472 ntBASIC18.11■□□□□ 0.49
Cux2P70298 Gm11235-201ENSMUST00000117763 333 ntBASIC18.11■□□□□ 0.49
Cux2P70298 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cux2P70298 0610033M10Rik-202ENSMUST00000205236 1102 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cux2P70298 Gm18122-201ENSMUST00000211390 904 ntBASIC18.11■□□□□ 0.49
Cux2P70298 Gm19090-201ENSMUST00000218187 774 ntBASIC18.11■□□□□ 0.49
Cux2P70298 AC161172.1-201ENSMUST00000227801 486 ntBASIC18.11■□□□□ 0.49
Cux2P70298 AC164883.7-201ENSMUST00000228534 851 ntBASIC18.11■□□□□ 0.49
Cux2P70298 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cux2P70298 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cux2P70298 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cux2P70298 Theg-201ENSMUST00000020566 1444 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cux2P70298 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cux2P70298 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Cux2P70298 Scnn1g-201ENSMUST00000000221 2991 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cux2P70298 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cux2P70298 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Cux2P70298 Il10-201ENSMUST00000016673 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cux2P70298 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Cux2P70298 Als2cr12-206ENSMUST00000191565 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cux2P70298 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cux2P70298 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cux2P70298 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cux2P70298 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC18.1■□□□□ 0.49
Cux2P70298 Oprk1-201ENSMUST00000027038 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cux2P70298 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Cux2P70298 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cux2P70298 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Cux2P70298 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cux2P70298 Snrnp27-201ENSMUST00000001186 885 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cux2P70298 Gm13758-201ENSMUST00000118699 743 ntBASIC18.1■□□□□ 0.49
Cux2P70298 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC18.1■□□□□ 0.49
Cux2P70298 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC18.1■□□□□ 0.49
Cux2P70298 Gm13191-201ENSMUST00000136489 416 ntTSL 3 BASIC18.1■□□□□ 0.49
Cux2P70298 4933438A12Rik-201ENSMUST00000144579 1013 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cux2P70298 Gng2-203ENSMUST00000159073 960 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Cux2P70298 1700028K03Rik-202ENSMUST00000159902 742 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Cux2P70298 Gm5766-202ENSMUST00000161633 799 ntBASIC18.1■□□□□ 0.49
Cux2P70298 Tspy-ps-203ENSMUST00000186546 989 ntBASIC18.1■□□□□ 0.49
Cux2P70298 Gm38048-201ENSMUST00000193778 2174 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cux2P70298 Gm3289-201ENSMUST00000200819 756 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cux2P70298 Gm44443-201ENSMUST00000204396 5633 ntBASIC18.1■□□□□ 0.49
Cux2P70298 Rack1-201ENSMUST00000020640 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cux2P70298 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms