Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Lmo4P61969 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Lmo4P61969 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Lmo4P61969 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Lmo4P61969 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Lmo4P61969 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Lmo4P61969 Gm43174-201ENSMUST00000195914 2445 ntBASIC9.1□□□□□ -0.95
Lmo4P61969 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Lmo4P61969 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Lmo4P61969 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Lmo4P61969 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Lmo4P61969 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Lmo4P61969 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC9.09□□□□□ -0.95
Lmo4P61969 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Lmo4P61969 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Lmo4P61969 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Lmo4P61969 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Lmo4P61969 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Lmo4P61969 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Lmo4P61969 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Lmo4P61969 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Lmo4P61969 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
Lmo4P61969 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Lmo4P61969 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Lmo4P61969 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Lmo4P61969 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC9.09□□□□□ -0.95
Lmo4P61969 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Lmo4P61969 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Lmo4P61969 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC9.09□□□□□ -0.95
Lmo4P61969 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Lmo4P61969 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Lmo4P61969 Gm15620-201ENSMUST00000122949 270 ntBASIC9.09□□□□□ -0.95
Lmo4P61969 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Lmo4P61969 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC9.09□□□□□ -0.95
Lmo4P61969 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Lmo4P61969 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Lmo4P61969 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Lmo4P61969 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Lmo4P61969 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC9.09□□□□□ -0.95
Lmo4P61969 Olfr1432-201ENSMUST00000180978 930 ntAPPRIS ALT2 BASIC9.09□□□□□ -0.95
Lmo4P61969 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC9.09□□□□□ -0.95
Lmo4P61969 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Lmo4P61969 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC9.09□□□□□ -0.95
Lmo4P61969 Gm31274-201ENSMUST00000197356 229 ntBASIC9.09□□□□□ -0.95
Lmo4P61969 Gm43249-201ENSMUST00000200464 458 ntBASIC9.09□□□□□ -0.95
Lmo4P61969 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC9.09□□□□□ -0.95
Lmo4P61969 Gm18204-201ENSMUST00000209835 793 ntBASIC9.09□□□□□ -0.95
Lmo4P61969 Gm4903-201ENSMUST00000210462 405 ntBASIC9.09□□□□□ -0.95
Lmo4P61969 AC159376.1-201ENSMUST00000218504 630 ntBASIC9.09□□□□□ -0.95
Lmo4P61969 AC159196.1-201ENSMUST00000225524 377 ntBASIC9.09□□□□□ -0.95
Lmo4P61969 CT025618.1-203ENSMUST00000227008 589 ntBASIC9.09□□□□□ -0.95
Lmo4P61969 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Lmo4P61969 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Lmo4P61969 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Lmo4P61969 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Lmo4P61969 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Lmo4P61969 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Lmo4P61969 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Lmo4P61969 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC9.09□□□□□ -0.95
Lmo4P61969 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Lmo4P61969 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Lmo4P61969 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Lmo4P61969 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Lmo4P61969 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Lmo4P61969 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC9.09□□□□□ -0.95
Lmo4P61969 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Lmo4P61969 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Lmo4P61969 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC9.09□□□□□ -0.95
Lmo4P61969 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC9.09□□□□□ -0.95
Lmo4P61969 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Lmo4P61969 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
Lmo4P61969 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Lmo4P61969 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Lmo4P61969 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Lmo4P61969 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Lmo4P61969 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC9.08□□□□□ -0.96
Lmo4P61969 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC9.08□□□□□ -0.96
Lmo4P61969 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC9.08□□□□□ -0.96
Lmo4P61969 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Lmo4P61969 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Lmo4P61969 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Lmo4P61969 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC9.08□□□□□ -0.96
Lmo4P61969 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC9.08□□□□□ -0.96
Lmo4P61969 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Lmo4P61969 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Lmo4P61969 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Lmo4P61969 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Lmo4P61969 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC9.08□□□□□ -0.96
Lmo4P61969 Gm11996-201ENSMUST00000117538 915 ntBASIC9.08□□□□□ -0.96
Lmo4P61969 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC9.08□□□□□ -0.96
Lmo4P61969 Gm15196-201ENSMUST00000121406 482 ntBASIC9.08□□□□□ -0.96
Lmo4P61969 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC9.08□□□□□ -0.96
Lmo4P61969 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Lmo4P61969 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Lmo4P61969 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Lmo4P61969 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC9.08□□□□□ -0.96
Lmo4P61969 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Lmo4P61969 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Lmo4P61969 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Lmo4P61969 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms