Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Polr2j-203ENSMUST00000111129 474 ntTSL 3 BASIC14.23□□□□□ -0.13
Msh6P54276 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC14.23□□□□□ -0.13
Msh6P54276 Gm16538-201ENSMUST00000162407 442 ntTSL 2 BASIC14.23□□□□□ -0.13
Msh6P54276 Gm9625-201ENSMUST00000180422 955 ntBASIC14.23□□□□□ -0.13
Msh6P54276 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC14.23□□□□□ -0.13
Msh6P54276 Cdk5-203ENSMUST00000198990 783 ntTSL 5 BASIC14.23□□□□□ -0.13
Msh6P54276 Gm9204-201ENSMUST00000212641 947 ntBASIC14.23□□□□□ -0.13
Msh6P54276 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Msh6P54276 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Msh6P54276 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Msh6P54276 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Msh6P54276 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Msh6P54276 Gm15519-201ENSMUST00000120088 1566 ntBASIC14.23□□□□□ -0.13
Msh6P54276 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC14.23□□□□□ -0.13
Msh6P54276 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC14.23□□□□□ -0.13
Msh6P54276 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Msh6P54276 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Msh6P54276 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Msh6P54276 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Msh6P54276 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Msh6P54276 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC14.23□□□□□ -0.13
Msh6P54276 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Msh6P54276 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Msh6P54276 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Msh6P54276 Gm13094-201ENSMUST00000117930 409 ntBASIC14.22□□□□□ -0.13
Msh6P54276 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC14.22□□□□□ -0.13
Msh6P54276 Gm45527-201ENSMUST00000211052 774 ntBASIC14.22□□□□□ -0.13
Msh6P54276 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC14.22□□□□□ -0.13
Msh6P54276 AC162938.2-202ENSMUST00000215497 722 ntTSL 5 BASIC14.22□□□□□ -0.13
Msh6P54276 AC134601.2-201ENSMUST00000221071 130 ntBASIC14.22□□□□□ -0.13
Msh6P54276 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Msh6P54276 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Msh6P54276 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Msh6P54276 Magea2-202ENSMUST00000112559 1302 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Msh6P54276 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Msh6P54276 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Msh6P54276 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Msh6P54276 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Msh6P54276 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC14.22□□□□□ -0.13
Msh6P54276 Gm5739-201ENSMUST00000208601 1703 ntBASIC14.22□□□□□ -0.13
Msh6P54276 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Msh6P54276 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Msh6P54276 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Msh6P54276 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Msh6P54276 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Msh6P54276 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Msh6P54276 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Msh6P54276 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC14.22□□□□□ -0.13
Msh6P54276 Gm42499-201ENSMUST00000196193 1412 ntBASIC14.22□□□□□ -0.13
Msh6P54276 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Msh6P54276 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Msh6P54276 Gm14005-209ENSMUST00000224993 1832 ntBASIC14.22□□□□□ -0.13
Msh6P54276 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Msh6P54276 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Msh6P54276 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Msh6P54276 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Msh6P54276 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Msh6P54276 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Msh6P54276 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Msh6P54276 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Msh6P54276 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Msh6P54276 Gm13326-201ENSMUST00000118730 1011 ntBASIC14.22□□□□□ -0.13
Msh6P54276 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Msh6P54276 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Msh6P54276 Gm23647-201ENSMUST00000175042 109 ntBASIC14.22□□□□□ -0.13
Msh6P54276 Rn5s-201ENSMUST00000177555 119 ntBASIC14.22□□□□□ -0.13
Msh6P54276 n-R5s108-201ENSMUST00000177575 119 ntBASIC14.22□□□□□ -0.13
Msh6P54276 n-R5s121-201ENSMUST00000177589 119 ntBASIC14.22□□□□□ -0.13
Msh6P54276 n-R5s146-201ENSMUST00000177889 119 ntBASIC14.22□□□□□ -0.13
Msh6P54276 Gm22109-201ENSMUST00000177995 119 ntBASIC14.22□□□□□ -0.13
Msh6P54276 Gm22291-201ENSMUST00000178027 119 ntBASIC14.22□□□□□ -0.13
Msh6P54276 n-R5s141-201ENSMUST00000178066 119 ntBASIC14.22□□□□□ -0.13
Msh6P54276 Gm23284-201ENSMUST00000178069 119 ntBASIC14.22□□□□□ -0.13
Msh6P54276 n-R5s100-201ENSMUST00000178106 119 ntBASIC14.22□□□□□ -0.13
Msh6P54276 n-R5s111-201ENSMUST00000178203 119 ntBASIC14.22□□□□□ -0.13
Msh6P54276 n-R5s105-201ENSMUST00000178499 119 ntBASIC14.22□□□□□ -0.13
Msh6P54276 n-R5s149-201ENSMUST00000178520 119 ntBASIC14.22□□□□□ -0.13
Msh6P54276 n-R5s103-201ENSMUST00000178755 119 ntBASIC14.22□□□□□ -0.13
Msh6P54276 n-R5s123-201ENSMUST00000178804 119 ntBASIC14.22□□□□□ -0.13
Msh6P54276 n-R5s142-201ENSMUST00000178820 119 ntBASIC14.22□□□□□ -0.13
Msh6P54276 n-R5s144-201ENSMUST00000178859 119 ntBASIC14.22□□□□□ -0.13
Msh6P54276 n-R5s139-201ENSMUST00000178975 119 ntBASIC14.22□□□□□ -0.13
Msh6P54276 n-R5s134-201ENSMUST00000178983 119 ntBASIC14.22□□□□□ -0.13
Msh6P54276 n-R5s136-201ENSMUST00000179080 119 ntBASIC14.22□□□□□ -0.13
Msh6P54276 Gm25018-201ENSMUST00000179081 119 ntBASIC14.22□□□□□ -0.13
Msh6P54276 n-R5s104-201ENSMUST00000179107 119 ntBASIC14.22□□□□□ -0.13
Msh6P54276 n-R5s113-201ENSMUST00000179143 119 ntBASIC14.22□□□□□ -0.13
Msh6P54276 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Msh6P54276 n-R5s133-201ENSMUST00000179275 119 ntBASIC14.22□□□□□ -0.13
Msh6P54276 n-R5s117-201ENSMUST00000179431 119 ntBASIC14.22□□□□□ -0.13
Msh6P54276 Gm25212-201ENSMUST00000179432 119 ntBASIC14.22□□□□□ -0.13
Msh6P54276 n-R5s138-201ENSMUST00000179476 119 ntBASIC14.22□□□□□ -0.13
Msh6P54276 n-R5s122-201ENSMUST00000179500 119 ntBASIC14.22□□□□□ -0.13
Msh6P54276 n-R5s143-201ENSMUST00000179542 119 ntBASIC14.22□□□□□ -0.13
Msh6P54276 n-R5s107-201ENSMUST00000179704 119 ntBASIC14.22□□□□□ -0.13
Msh6P54276 Gm26391-201ENSMUST00000179843 119 ntBASIC14.22□□□□□ -0.13
Msh6P54276 n-R5s110-201ENSMUST00000179995 119 ntBASIC14.22□□□□□ -0.13
Msh6P54276 n-R5s128-201ENSMUST00000180096 119 ntBASIC14.22□□□□□ -0.13
Msh6P54276 n-R5s124-201ENSMUST00000180334 119 ntBASIC14.22□□□□□ -0.13
Msh6P54276 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms