Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sox6P40645 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Sox6P40645 Gm17040-202ENSMUST00000170597 889 ntBASIC10.61□□□□□ -0.71
Sox6P40645 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Sox6P40645 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Sox6P40645 Rps4l-202ENSMUST00000204242 789 ntBASIC10.61□□□□□ -0.71
Sox6P40645 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Sox6P40645 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC10.61□□□□□ -0.71
Sox6P40645 Gm19208-201ENSMUST00000213861 912 ntBASIC10.61□□□□□ -0.71
Sox6P40645 Gm21027-201ENSMUST00000219300 1236 ntBASIC10.61□□□□□ -0.71
Sox6P40645 CT025694.1-201ENSMUST00000226188 934 ntBASIC10.61□□□□□ -0.71
Sox6P40645 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sox6P40645 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC10.61□□□□□ -0.71
Sox6P40645 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sox6P40645 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Sox6P40645 Thsd7a-206ENSMUST00000172356 10998 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Sox6P40645 Acot11-202ENSMUST00000102762 5689 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sox6P40645 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sox6P40645 Plekha7-207ENSMUST00000182511 4502 ntTSL 2 BASIC10.61□□□□□ -0.71
Sox6P40645 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Sox6P40645 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Sox6P40645 Gm5740-201ENSMUST00000211003 1857 ntBASIC10.61□□□□□ -0.71
Sox6P40645 Nfkbiz-201ENSMUST00000036273 4115 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sox6P40645 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC10.61□□□□□ -0.71
Sox6P40645 Gm29358-202ENSMUST00000187941 3227 ntBASIC10.61□□□□□ -0.71
Sox6P40645 Gm37368-201ENSMUST00000193173 3212 ntBASIC10.61□□□□□ -0.71
Sox6P40645 Peg10-201ENSMUST00000166678 6662 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Sox6P40645 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Sox6P40645 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Sox6P40645 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sox6P40645 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
Sox6P40645 Gm5124-202ENSMUST00000132683 2083 ntBASIC10.61□□□□□ -0.71
Sox6P40645 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sox6P40645 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sox6P40645 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Sox6P40645 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sox6P40645 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sox6P40645 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sox6P40645 Plekha7-201ENSMUST00000084664 4312 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Sox6P40645 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Sox6P40645 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sox6P40645 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sox6P40645 6430573F11Rik-203ENSMUST00000147525 5820 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sox6P40645 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC10.6□□□□□ -0.71
Sox6P40645 Gm43807-201ENSMUST00000200678 1781 ntBASIC10.6□□□□□ -0.71
Sox6P40645 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sox6P40645 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Sox6P40645 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Sox6P40645 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sox6P40645 Wbp1l-202ENSMUST00000111855 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sox6P40645 Gm9072-201ENSMUST00000218390 1514 ntBASIC10.6□□□□□ -0.71
Sox6P40645 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sox6P40645 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Sox6P40645 Dysf-211ENSMUST00000168387 6501 ntTSL 5 BASIC10.6□□□□□ -0.71
Sox6P40645 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sox6P40645 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sox6P40645 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC10.6□□□□□ -0.71
Sox6P40645 Gm13326-201ENSMUST00000118730 1011 ntBASIC10.6□□□□□ -0.71
Sox6P40645 Gm16481-201ENSMUST00000119074 1227 ntBASIC10.6□□□□□ -0.71
Sox6P40645 Gm14441-201ENSMUST00000121960 540 ntBASIC10.6□□□□□ -0.71
Sox6P40645 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Sox6P40645 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC10.6□□□□□ -0.71
Sox6P40645 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Sox6P40645 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Sox6P40645 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Sox6P40645 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
Sox6P40645 Gm28686-201ENSMUST00000187404 609 ntBASIC10.6□□□□□ -0.71
Sox6P40645 Gm3332-201ENSMUST00000189337 928 ntBASIC10.6□□□□□ -0.71
Sox6P40645 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC10.6□□□□□ -0.71
Sox6P40645 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Sox6P40645 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Sox6P40645 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC10.6□□□□□ -0.71
Sox6P40645 Gm9797-202ENSMUST00000218003 294 ntBASIC10.6□□□□□ -0.71
Sox6P40645 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sox6P40645 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sox6P40645 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sox6P40645 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Sox6P40645 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sox6P40645 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Sox6P40645 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC10.6□□□□□ -0.71
Sox6P40645 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sox6P40645 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Sox6P40645 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sox6P40645 AC107453.4-201ENSMUST00000227068 1817 ntBASIC10.6□□□□□ -0.71
Sox6P40645 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sox6P40645 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
Sox6P40645 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Sox6P40645 AC113441.2-201ENSMUST00000221538 1468 ntBASIC10.6□□□□□ -0.71
Sox6P40645 Pask-201ENSMUST00000027493 5779 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sox6P40645 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sox6P40645 Myom2-201ENSMUST00000033842 5075 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sox6P40645 Pxdn-208ENSMUST00000220271 6377 ntTSL 5 BASIC10.6□□□□□ -0.71
Sox6P40645 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Sox6P40645 Pck2-201ENSMUST00000048781 3400 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Sox6P40645 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Sox6P40645 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Sox6P40645 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Sox6P40645 Spata33-207ENSMUST00000212760 4074 ntBASIC10.59□□□□□ -0.71
Sox6P40645 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC10.59□□□□□ -0.71
Sox6P40645 Gm18986-201ENSMUST00000216029 1986 ntBASIC10.59□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms