Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Chd1P40201 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Chd1P40201 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chd1P40201 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chd1P40201 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC16.51■□□□□ 0.23
Chd1P40201 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Chd1P40201 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Chd1P40201 Phactr1-214ENSMUST00000149235 2076 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Chd1P40201 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC16.51■□□□□ 0.23
Chd1P40201 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC16.51■□□□□ 0.23
Chd1P40201 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chd1P40201 Mir675-201ENSMUST00000102320 84 ntBASIC16.51■□□□□ 0.23
Chd1P40201 Gm11686-201ENSMUST00000122397 333 ntBASIC16.51■□□□□ 0.23
Chd1P40201 Gm6633-201ENSMUST00000173851 270 ntBASIC16.51■□□□□ 0.23
Chd1P40201 Gm22876-201ENSMUST00000175450 298 ntBASIC16.51■□□□□ 0.23
Chd1P40201 Gm37872-201ENSMUST00000192362 886 ntTSL 5 BASIC16.51■□□□□ 0.23
Chd1P40201 1700048F04Rik-201ENSMUST00000199057 1064 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Chd1P40201 Pcbd1-202ENSMUST00000218005 361 ntTSL 3 BASIC16.51■□□□□ 0.23
Chd1P40201 AC116797.2-203ENSMUST00000225290 565 ntBASIC16.51■□□□□ 0.23
Chd1P40201 Mettl7b-201ENSMUST00000026398 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chd1P40201 Olfr707-204ENSMUST00000213251 1777 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Chd1P40201 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chd1P40201 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chd1P40201 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chd1P40201 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chd1P40201 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC16.51■□□□□ 0.23
Chd1P40201 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
Chd1P40201 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC16.51■□□□□ 0.23
Chd1P40201 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chd1P40201 Serpina5-201ENSMUST00000021495 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chd1P40201 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chd1P40201 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chd1P40201 Gm26637-201ENSMUST00000180880 2289 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Chd1P40201 Gtf2e2-203ENSMUST00000171010 1664 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Chd1P40201 Dcstamp-205ENSMUST00000228556 1684 ntBASIC16.51■□□□□ 0.23
Chd1P40201 Ccser2-203ENSMUST00000182042 1420 ntTSL 5 BASIC16.51■□□□□ 0.23
Chd1P40201 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chd1P40201 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC16.51■□□□□ 0.23
Chd1P40201 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chd1P40201 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chd1P40201 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Chd1P40201 Tmem254c-201ENSMUST00000100818 1066 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Chd1P40201 Ccdc32-203ENSMUST00000110834 828 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Chd1P40201 A730090N16Rik-201ENSMUST00000160137 627 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Chd1P40201 Gm31784-201ENSMUST00000209523 1053 ntTSL 5 BASIC16.5■□□□□ 0.23
Chd1P40201 Gm36287-201ENSMUST00000223481 796 ntTSL 5 BASIC16.5■□□□□ 0.23
Chd1P40201 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chd1P40201 Gm44975-201ENSMUST00000207435 1390 ntBASIC16.5■□□□□ 0.23
Chd1P40201 AC134898.1-201ENSMUST00000223738 1836 ntBASIC16.5■□□□□ 0.23
Chd1P40201 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Chd1P40201 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chd1P40201 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chd1P40201 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Chd1P40201 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chd1P40201 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chd1P40201 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Chd1P40201 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Chd1P40201 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC16.5■□□□□ 0.23
Chd1P40201 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Chd1P40201 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chd1P40201 Spata7-202ENSMUST00000101144 1541 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Chd1P40201 Gm6727-201ENSMUST00000204102 1518 ntBASIC16.5■□□□□ 0.23
Chd1P40201 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chd1P40201 C330021F23Rik-202ENSMUST00000136592 1621 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chd1P40201 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chd1P40201 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chd1P40201 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Chd1P40201 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Chd1P40201 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chd1P40201 Gm14276-201ENSMUST00000117941 720 ntBASIC16.5■□□□□ 0.23
Chd1P40201 Gm11771-201ENSMUST00000118124 732 ntBASIC16.5■□□□□ 0.23
Chd1P40201 Gm28845-201ENSMUST00000144760 733 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Chd1P40201 Gm26241-201ENSMUST00000174944 101 ntBASIC16.5■□□□□ 0.23
Chd1P40201 Gm23976-201ENSMUST00000175001 101 ntBASIC16.5■□□□□ 0.23
Chd1P40201 Gm22463-201ENSMUST00000175274 101 ntBASIC16.5■□□□□ 0.23
Chd1P40201 Gm22547-201ENSMUST00000175281 101 ntBASIC16.5■□□□□ 0.23
Chd1P40201 Gm22913-201ENSMUST00000175297 101 ntBASIC16.5■□□□□ 0.23
Chd1P40201 Gm23282-201ENSMUST00000175306 101 ntBASIC16.5■□□□□ 0.23
Chd1P40201 Gm25972-201ENSMUST00000175374 101 ntBASIC16.5■□□□□ 0.23
Chd1P40201 Gm22414-201ENSMUST00000175466 101 ntBASIC16.5■□□□□ 0.23
Chd1P40201 Gm26235-201ENSMUST00000175533 101 ntBASIC16.5■□□□□ 0.23
Chd1P40201 Gm25084-201ENSMUST00000175556 101 ntBASIC16.5■□□□□ 0.23
Chd1P40201 Gm24973-201ENSMUST00000175588 101 ntBASIC16.5■□□□□ 0.23
Chd1P40201 Gm23292-201ENSMUST00000175618 101 ntBASIC16.5■□□□□ 0.23
Chd1P40201 Gm23646-201ENSMUST00000178119 101 ntBASIC16.5■□□□□ 0.23
Chd1P40201 Gm24643-201ENSMUST00000178305 101 ntBASIC16.5■□□□□ 0.23
Chd1P40201 Gm24302-201ENSMUST00000178350 101 ntBASIC16.5■□□□□ 0.23
Chd1P40201 Gm26386-201ENSMUST00000178407 101 ntBASIC16.5■□□□□ 0.23
Chd1P40201 Gm25458-201ENSMUST00000178981 101 ntBASIC16.5■□□□□ 0.23
Chd1P40201 Gm22825-201ENSMUST00000179444 101 ntBASIC16.5■□□□□ 0.23
Chd1P40201 Gm17250-201ENSMUST00000180494 1010 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Chd1P40201 Gm7565-201ENSMUST00000203611 623 ntBASIC16.5■□□□□ 0.23
Chd1P40201 AC161374.2-201ENSMUST00000223662 596 ntBASIC16.5■□□□□ 0.23
Chd1P40201 Cxcr1-201ENSMUST00000053389 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chd1P40201 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC16.5■□□□□ 0.23
Chd1P40201 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Chd1P40201 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC16.5■□□□□ 0.23
Chd1P40201 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Chd1P40201 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chd1P40201 Gm32540-201ENSMUST00000207174 1872 ntTSL 5 BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms