Protein–RNA interactions for Protein: P33215

Nedd1, Protein NEDD1, mousemouse

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd1P33215 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nedd1P33215 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nedd1P33215 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nedd1P33215 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nedd1P33215 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC12.65□□□□□ -0.38
Nedd1P33215 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC12.65□□□□□ -0.38
Nedd1P33215 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nedd1P33215 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nedd1P33215 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Nedd1P33215 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
Nedd1P33215 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Nedd1P33215 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Nedd1P33215 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nedd1P33215 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nedd1P33215 Gm26540-201ENSMUST00000181858 1310 ntTSL 5 BASIC12.64□□□□□ -0.39
Nedd1P33215 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Nedd1P33215 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nedd1P33215 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nedd1P33215 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nedd1P33215 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nedd1P33215 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Nedd1P33215 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nedd1P33215 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC12.64□□□□□ -0.39
Nedd1P33215 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nedd1P33215 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nedd1P33215 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC12.64□□□□□ -0.39
Nedd1P33215 Snord23-201ENSMUST00000116828 109 ntBASIC12.64□□□□□ -0.39
Nedd1P33215 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC12.64□□□□□ -0.39
Nedd1P33215 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC12.64□□□□□ -0.39
Nedd1P33215 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC12.64□□□□□ -0.39
Nedd1P33215 Gm19013-201ENSMUST00000183895 1222 ntBASIC12.64□□□□□ -0.39
Nedd1P33215 Gm19014-201ENSMUST00000184828 1189 ntBASIC12.64□□□□□ -0.39
Nedd1P33215 Gm37028-201ENSMUST00000194276 107 ntBASIC12.64□□□□□ -0.39
Nedd1P33215 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Nedd1P33215 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC12.64□□□□□ -0.39
Nedd1P33215 Saa-ps-201ENSMUST00000211148 320 ntBASIC12.64□□□□□ -0.39
Nedd1P33215 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nedd1P33215 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nedd1P33215 AC140293.1-201ENSMUST00000225626 1247 ntBASIC12.64□□□□□ -0.39
Nedd1P33215 AC129308.3-201ENSMUST00000225652 524 ntBASIC12.64□□□□□ -0.39
Nedd1P33215 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Nedd1P33215 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Nedd1P33215 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nedd1P33215 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nedd1P33215 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nedd1P33215 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nedd1P33215 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Nedd1P33215 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Nedd1P33215 Gm45206-201ENSMUST00000206885 2285 ntBASIC12.64□□□□□ -0.39
Nedd1P33215 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nedd1P33215 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nedd1P33215 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nedd1P33215 Gm6560-201ENSMUST00000198588 1591 ntBASIC12.64□□□□□ -0.39
Nedd1P33215 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nedd1P33215 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nedd1P33215 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nedd1P33215 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nedd1P33215 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Nedd1P33215 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Nedd1P33215 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nedd1P33215 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC12.63□□□□□ -0.39
Nedd1P33215 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Nedd1P33215 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nedd1P33215 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nedd1P33215 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Nedd1P33215 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nedd1P33215 AC153380.1-201ENSMUST00000214959 2364 ntBASIC12.63□□□□□ -0.39
Nedd1P33215 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nedd1P33215 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nedd1P33215 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nedd1P33215 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Nedd1P33215 Mir453-201ENSMUST00000104732 82 ntBASIC12.63□□□□□ -0.39
Nedd1P33215 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC12.63□□□□□ -0.39
Nedd1P33215 Gm14592-201ENSMUST00000117201 560 ntBASIC12.63□□□□□ -0.39
Nedd1P33215 Gm11952-201ENSMUST00000121172 821 ntBASIC12.63□□□□□ -0.39
Nedd1P33215 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nedd1P33215 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC12.63□□□□□ -0.39
Nedd1P33215 Gm22379-201ENSMUST00000157480 131 ntBASIC12.63□□□□□ -0.39
Nedd1P33215 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nedd1P33215 Gm16165-201ENSMUST00000160140 795 ntBASIC12.63□□□□□ -0.39
Nedd1P33215 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC12.63□□□□□ -0.39
Nedd1P33215 Gm9081-201ENSMUST00000182346 991 ntBASIC12.63□□□□□ -0.39
Nedd1P33215 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Nedd1P33215 Gm7525-201ENSMUST00000219425 454 ntBASIC12.63□□□□□ -0.39
Nedd1P33215 Gm16380-201ENSMUST00000077997 478 ntBASIC12.63□□□□□ -0.39
Nedd1P33215 n-R5s185-201ENSMUST00000083953 119 ntBASIC12.63□□□□□ -0.39
Nedd1P33215 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.63□□□□□ -0.39
Nedd1P33215 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nedd1P33215 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nedd1P33215 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nedd1P33215 Gm42815-201ENSMUST00000198787 1470 ntBASIC12.63□□□□□ -0.39
Nedd1P33215 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nedd1P33215 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nedd1P33215 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nedd1P33215 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nedd1P33215 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nedd1P33215 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nedd1P33215 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nedd1P33215 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nedd1P33215 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms